Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL161756.2-201ENST00000604597 246 ntBASIC2.92□□□□□ -1.94
CLDN20P56880 RMST_3.1-201ENST00000611651 109 ntBASIC2.92□□□□□ -1.94
CLDN20P56880 AL020991.1-201ENST00000612314 373 ntBASIC2.92□□□□□ -1.94
CLDN20P56880 DUSP12P1-201ENST00000612874 516 ntBASIC2.92□□□□□ -1.94
CLDN20P56880 AC006111.3-201ENST00000622137 383 ntBASIC2.92□□□□□ -1.94
CLDN20P56880 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.92□□□□□ -1.94
CLDN20P56880 MIR3651-201ENST00000630427 90 ntBASIC2.92□□□□□ -1.94
CLDN20P56880 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.92□□□□□ -1.94
CLDN20P56880 AC024614.3-201ENST00000637860 256 ntBASIC2.92□□□□□ -1.94
CLDN20P56880 OR4G1P-203ENST00000641984 1631 ntBASIC2.92□□□□□ -1.94
CLDN20P56880 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CLDN20P56880 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
CLDN20P56880 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
CLDN20P56880 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
CLDN20P56880 AL353743.1-202ENST00000431724 1695 ntBASIC2.92□□□□□ -1.94
CLDN20P56880 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
CLDN20P56880 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CLDN20P56880 Y_RNA.33-201ENST00000362591 102 ntBASIC2.91□□□□□ -1.94
CLDN20P56880 RNU6-270P-201ENST00000364131 105 ntBASIC2.91□□□□□ -1.94
CLDN20P56880 SNORA38.1-201ENST00000364172 131 ntBASIC2.91□□□□□ -1.94
CLDN20P56880 RNU6-371P-201ENST00000364283 108 ntBASIC2.91□□□□□ -1.94
CLDN20P56880 RNU6-715P-201ENST00000365204 103 ntBASIC2.91□□□□□ -1.94
CLDN20P56880 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.91□□□□□ -1.94
CLDN20P56880 RNU6-38P-201ENST00000384085 107 ntBASIC2.91□□□□□ -1.94
CLDN20P56880 MIR514A2-201ENST00000385131 88 ntBASIC2.91□□□□□ -1.94
CLDN20P56880 MIR514A3-201ENST00000385132 88 ntBASIC2.91□□□□□ -1.94
CLDN20P56880 SNORA48.8-201ENST00000391324 134 ntBASIC2.91□□□□□ -1.94
CLDN20P56880 AL592114.1-201ENST00000403842 483 ntBASIC2.91□□□□□ -1.94
CLDN20P56880 RNA5SP229-201ENST00000410809 99 ntBASIC2.91□□□□□ -1.94
CLDN20P56880 RNU6-373P-201ENST00000411247 98 ntBASIC2.91□□□□□ -1.94
CLDN20P56880 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.91□□□□□ -1.94
CLDN20P56880 CST9LP2-201ENST00000437612 320 ntBASIC2.91□□□□□ -1.94
CLDN20P56880 HIGD1AP11-201ENST00000438361 280 ntBASIC2.91□□□□□ -1.94
CLDN20P56880 AC006028.1-201ENST00000438379 402 ntBASIC2.91□□□□□ -1.94
CLDN20P56880 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.91□□□□□ -1.94
CLDN20P56880 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.91□□□□□ -1.94
CLDN20P56880 MTND3P16-201ENST00000452205 344 ntBASIC2.91□□□□□ -1.94
CLDN20P56880 RNU6-333P-201ENST00000459117 107 ntBASIC2.91□□□□□ -1.94
CLDN20P56880 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.91□□□□□ -1.94
CLDN20P56880 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CLDN20P56880 SNORA70.24-201ENST00000517233 118 ntBASIC2.91□□□□□ -1.94
CLDN20P56880 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.91□□□□□ -1.94
CLDN20P56880 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.91□□□□□ -1.94
CLDN20P56880 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.91□□□□□ -1.94
CLDN20P56880 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.91□□□□□ -1.94
CLDN20P56880 AC106782.4-201ENST00000568264 210 ntBASIC2.91□□□□□ -1.94
CLDN20P56880 AC010525.2-201ENST00000590920 195 ntBASIC2.91□□□□□ -1.94
CLDN20P56880 YPEL5P2-201ENST00000605553 359 ntBASIC2.91□□□□□ -1.94
CLDN20P56880 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
CLDN20P56880 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.91□□□□□ -1.94
CLDN20P56880 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.91□□□□□ -1.94
CLDN20P56880 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.91□□□□□ -1.94
CLDN20P56880 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.9□□□□□ -1.94
CLDN20P56880 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CLDN20P56880 MTND5P7-201ENST00000413558 1798 ntBASIC2.9□□□□□ -1.94
CLDN20P56880 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
CLDN20P56880 Y_RNA.231-201ENST00000364358 102 ntBASIC2.9□□□□□ -1.95
CLDN20P56880 RNU4-66P-201ENST00000365199 138 ntBASIC2.9□□□□□ -1.95
CLDN20P56880 RNU4-20P-201ENST00000365601 151 ntBASIC2.9□□□□□ -1.95
CLDN20P56880 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.9□□□□□ -1.95
CLDN20P56880 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.9□□□□□ -1.95
CLDN20P56880 MIR888-201ENST00000401186 77 ntBASIC2.9□□□□□ -1.95
CLDN20P56880 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.9□□□□□ -1.95
CLDN20P56880 RNU6-1077P-201ENST00000410506 102 ntBASIC2.9□□□□□ -1.95
CLDN20P56880 RNU6-1025P-201ENST00000410629 104 ntBASIC2.9□□□□□ -1.95
CLDN20P56880 RNA5SP344-201ENST00000411081 104 ntBASIC2.9□□□□□ -1.95
CLDN20P56880 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.9□□□□□ -1.95
CLDN20P56880 ARL5AP1-201ENST00000418991 388 ntBASIC2.9□□□□□ -1.95
CLDN20P56880 MTCO3P18-201ENST00000440206 761 ntBASIC2.9□□□□□ -1.95
CLDN20P56880 RPS3AP12-201ENST00000443616 753 ntBASIC2.9□□□□□ -1.95
CLDN20P56880 RPS15AP27-201ENST00000449183 343 ntBASIC2.9□□□□□ -1.95
CLDN20P56880 AC069439.1-201ENST00000494739 167 ntBASIC2.9□□□□□ -1.95
CLDN20P56880 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.9□□□□□ -1.95
CLDN20P56880 AC009901.1-201ENST00000506703 541 ntBASIC2.9□□□□□ -1.95
CLDN20P56880 PRDX4P1-201ENST00000507189 574 ntBASIC2.9□□□□□ -1.95
CLDN20P56880 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.9□□□□□ -1.95
CLDN20P56880 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CLDN20P56880 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.9□□□□□ -1.95
CLDN20P56880 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.9□□□□□ -1.95
CLDN20P56880 MTCO3P24-201ENST00000572729 782 ntBASIC2.9□□□□□ -1.95
CLDN20P56880 MIR2682-201ENST00000580305 110 ntBASIC2.9□□□□□ -1.95
CLDN20P56880 MIR5583-1-201ENST00000580941 59 ntBASIC2.9□□□□□ -1.95
CLDN20P56880 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.9□□□□□ -1.95
CLDN20P56880 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
CLDN20P56880 AC073308.1-201ENST00000623696 305 ntBASIC2.9□□□□□ -1.95
CLDN20P56880 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.9□□□□□ -1.95
CLDN20P56880 AC004520.1-201ENST00000608362 1413 ntBASIC2.9□□□□□ -1.95
CLDN20P56880 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
CLDN20P56880 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
CLDN20P56880 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CLDN20P56880 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CLDN20P56880 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CLDN20P56880 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.89□□□□□ -1.95
CLDN20P56880 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
CLDN20P56880 RNU6-434P-201ENST00000384376 107 ntBASIC2.89□□□□□ -1.95
CLDN20P56880 RNU6-393P-201ENST00000384475 107 ntBASIC2.89□□□□□ -1.95
CLDN20P56880 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CLDN20P56880 SNORD70.1-201ENST00000391007 85 ntBASIC2.89□□□□□ -1.95
CLDN20P56880 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.89□□□□□ -1.95
CLDN20P56880 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms