Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RNU2-49P-201ENST00000410666 184 ntBASIC1.24□□□□□ -2.21
NUP98P52948 OR51A5P-201ENST00000415429 942 ntBASIC1.24□□□□□ -2.21
NUP98P52948 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.24□□□□□ -2.21
NUP98P52948 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.24□□□□□ -2.21
NUP98P52948 GDI2P2-201ENST00000445131 608 ntBASIC1.24□□□□□ -2.21
NUP98P52948 RPS29P28-201ENST00000446439 141 ntBASIC1.24□□□□□ -2.21
NUP98P52948 AC007395.1-201ENST00000451333 677 ntBASIC1.24□□□□□ -2.21
NUP98P52948 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.24□□□□□ -2.21
NUP98P52948 RPL21P134-201ENST00000453468 483 ntBASIC1.24□□□□□ -2.21
NUP98P52948 AC107032.1-201ENST00000485945 480 ntBASIC1.24□□□□□ -2.21
NUP98P52948 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.24□□□□□ -2.21
NUP98P52948 AC098591.2-201ENST00000510152 315 ntBASIC1.24□□□□□ -2.21
NUP98P52948 MRPS33P3-201ENST00000513456 322 ntBASIC1.24□□□□□ -2.21
NUP98P52948 SNORA31.16-201ENST00000516773 139 ntBASIC1.24□□□□□ -2.21
NUP98P52948 RNU6-528P-201ENST00000516926 100 ntBASIC1.24□□□□□ -2.21
NUP98P52948 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.24□□□□□ -2.21
NUP98P52948 AC022880.1-201ENST00000534017 973 ntBASIC1.24□□□□□ -2.21
NUP98P52948 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.24□□□□□ -2.21
NUP98P52948 AC011451.2-201ENST00000604303 598 ntBASIC1.24□□□□□ -2.21
NUP98P52948 AC016911.1-201ENST00000613297 452 ntBASIC1.24□□□□□ -2.21
NUP98P52948 AC104763.3-201ENST00000613765 618 ntBASIC1.24□□□□□ -2.21
NUP98P52948 PVT1_3.1-201ENST00000620853 95 ntBASIC1.24□□□□□ -2.21
NUP98P52948 RNA5SP276-201ENST00000362580 94 ntBASIC1.23□□□□□ -2.21
NUP98P52948 RNA5SP450-201ENST00000411206 102 ntBASIC1.23□□□□□ -2.21
NUP98P52948 AL158823.1-201ENST00000418441 478 ntBASIC1.23□□□□□ -2.21
NUP98P52948 VN1R42P-201ENST00000424651 344 ntBASIC1.23□□□□□ -2.21
NUP98P52948 AC093106.2-201ENST00000428212 385 ntBASIC1.23□□□□□ -2.21
NUP98P52948 AL161788.1-201ENST00000441805 169 ntBASIC1.23□□□□□ -2.21
NUP98P52948 RPS27P1-201ENST00000450552 247 ntBASIC1.23□□□□□ -2.21
NUP98P52948 RPL22P13-201ENST00000493291 347 ntBASIC1.23□□□□□ -2.21
NUP98P52948 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
NUP98P52948 AC093752.1-206ENST00000511823 336 ntBASIC1.23□□□□□ -2.21
NUP98P52948 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
NUP98P52948 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.23□□□□□ -2.21
NUP98P52948 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.23□□□□□ -2.21
NUP98P52948 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1.23□□□□□ -2.21
NUP98P52948 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.23□□□□□ -2.21
NUP98P52948 AC002550.2-201ENST00000621246 394 ntBASIC1.23□□□□□ -2.21
NUP98P52948 AC079416.3-201ENST00000624479 549 ntBASIC1.23□□□□□ -2.21
NUP98P52948 RNY1-201ENST00000364228 113 ntBASIC1.22□□□□□ -2.21
NUP98P52948 RNU1-133P-201ENST00000364867 167 ntBASIC1.22□□□□□ -2.21
NUP98P52948 MIR218-1-201ENST00000384999 110 ntBASIC1.22□□□□□ -2.21
NUP98P52948 RNU11-5P-201ENST00000391216 129 ntBASIC1.22□□□□□ -2.21
NUP98P52948 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.22□□□□□ -2.21
NUP98P52948 AC007919.1-201ENST00000429380 217 ntBASIC1.22□□□□□ -2.21
NUP98P52948 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.22□□□□□ -2.21
NUP98P52948 TPRKBP1-201ENST00000456243 481 ntBASIC1.22□□□□□ -2.21
NUP98P52948 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.22□□□□□ -2.21
NUP98P52948 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.22□□□□□ -2.21
NUP98P52948 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.22□□□□□ -2.21
NUP98P52948 CBX3P7-201ENST00000532876 502 ntBASIC1.22□□□□□ -2.21
NUP98P52948 DUXAP1-201ENST00000556632 463 ntBASIC1.22□□□□□ -2.21
NUP98P52948 AC079148.1-201ENST00000565944 819 ntBASIC1.22□□□□□ -2.21
NUP98P52948 AC090079.2-201ENST00000575289 768 ntBASIC1.22□□□□□ -2.21
NUP98P52948 AC026271.5-201ENST00000577873 130 ntBASIC1.22□□□□□ -2.21
NUP98P52948 MIR4299-201ENST00000577899 72 ntBASIC1.22□□□□□ -2.21
NUP98P52948 MIR4713-201ENST00000582691 75 ntBASIC1.22□□□□□ -2.21
NUP98P52948 AC004853.1-201ENST00000604902 698 ntBASIC1.22□□□□□ -2.21
NUP98P52948 AL138963.2-201ENST00000605137 226 ntBASIC1.22□□□□□ -2.21
NUP98P52948 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
NUP98P52948 RNU6-650P-201ENST00000365658 111 ntBASIC1.22□□□□□ -2.21
NUP98P52948 MIR95-201ENST00000385072 81 ntBASIC1.22□□□□□ -2.21
NUP98P52948 HMGN2P39-201ENST00000398005 273 ntBASIC1.22□□□□□ -2.21
NUP98P52948 MIR934-201ENST00000401241 83 ntBASIC1.22□□□□□ -2.21
NUP98P52948 AL109755.1-201ENST00000401791 649 ntBASIC1.22□□□□□ -2.21
NUP98P52948 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.22□□□□□ -2.21
NUP98P52948 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.22□□□□□ -2.21
NUP98P52948 BTF3P8-201ENST00000414577 526 ntBASIC1.22□□□□□ -2.21
NUP98P52948 AC007435.1-201ENST00000421086 415 ntBASIC1.22□□□□□ -2.21
NUP98P52948 AL160275.3-201ENST00000423876 471 ntBASIC1.22□□□□□ -2.21
NUP98P52948 RPL7P34-201ENST00000433316 712 ntBASIC1.22□□□□□ -2.21
NUP98P52948 AC002381.1-201ENST00000447049 280 ntBASIC1.22□□□□□ -2.21
NUP98P52948 AL096803.2-201ENST00000450032 677 ntBASIC1.22□□□□□ -2.21
NUP98P52948 RPL12P25-201ENST00000455592 494 ntBASIC1.22□□□□□ -2.21
NUP98P52948 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.22□□□□□ -2.21
NUP98P52948 RNA5SP290-201ENST00000517133 127 ntBASIC1.22□□□□□ -2.21
NUP98P52948 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.22□□□□□ -2.21
NUP98P52948 AC016727.2-201ENST00000603988 621 ntBASIC1.22□□□□□ -2.21
NUP98P52948 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.22□□□□□ -2.21
NUP98P52948 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.21□□□□□ -2.21
NUP98P52948 AC080100.1-201ENST00000624239 5356 ntBASIC1.21□□□□□ -2.22
NUP98P52948 RNU6-657P-201ENST00000383904 107 ntBASIC1.21□□□□□ -2.22
NUP98P52948 RNU6-342P-201ENST00000384521 104 ntBASIC1.21□□□□□ -2.22
NUP98P52948 MTCO1P53-201ENST00000441633 699 ntBASIC1.21□□□□□ -2.22
NUP98P52948 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.21□□□□□ -2.22
NUP98P52948 RPL39P6-201ENST00000448289 150 ntBASIC1.21□□□□□ -2.22
NUP98P52948 OFD1P3Y-201ENST00000453312 783 ntBASIC1.21□□□□□ -2.22
NUP98P52948 KATNBL1P6-201ENST00000453433 915 ntBASIC1.21□□□□□ -2.22
NUP98P52948 AC117503.1-201ENST00000472241 394 ntBASIC1.21□□□□□ -2.22
NUP98P52948 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.21□□□□□ -2.22
NUP98P52948 RPL36AP48-201ENST00000485521 314 ntBASIC1.21□□□□□ -2.22
NUP98P52948 RNA5SP112-201ENST00000515937 99 ntBASIC1.21□□□□□ -2.22
NUP98P52948 NRON-201ENST00000517270 370 ntBASIC1.21□□□□□ -2.22
NUP98P52948 AC107953.1-201ENST00000522216 297 ntBASIC1.21□□□□□ -2.22
NUP98P52948 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.21□□□□□ -2.22
NUP98P52948 AC135279.1-201ENST00000543493 504 ntBASIC1.21□□□□□ -2.22
NUP98P52948 MIR3198-2-201ENST00000577868 80 ntBASIC1.21□□□□□ -2.22
NUP98P52948 AL139344.1-201ENST00000605228 195 ntBASIC1.21□□□□□ -2.22
NUP98P52948 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.21□□□□□ -2.22
NUP98P52948 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms