Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 MIR4675-201ENST00000577898 77 ntBASIC6.11□□□□□ -1.43
CD44P16070 AL162713.1-201ENST00000604480 262 ntBASIC6.11□□□□□ -1.43
CD44P16070 AC107294.3-201ENST00000609211 526 ntBASIC6.11□□□□□ -1.43
CD44P16070 AC244100.4-201ENST00000617747 388 ntBASIC6.11□□□□□ -1.43
CD44P16070 AC006160.2-201ENST00000637708 154 ntBASIC6.11□□□□□ -1.43
CD44P16070 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CD44P16070 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.11□□□□□ -1.43
CD44P16070 AC017071.1-201ENST00000564407 2204 ntBASIC6.11□□□□□ -1.43
CD44P16070 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CD44P16070 AC020656.2-201ENST00000613291 5309 ntBASIC6.11□□□□□ -1.43
CD44P16070 AC106871.1-201ENST00000568324 3102 ntBASIC6.11□□□□□ -1.43
CD44P16070 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CD44P16070 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CD44P16070 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CD44P16070 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CD44P16070 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.1□□□□□ -1.43
CD44P16070 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CD44P16070 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CD44P16070 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CD44P16070 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC6.1□□□□□ -1.43
CD44P16070 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CD44P16070 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
CD44P16070 SNORD115-35-201ENST00000365122 82 ntBASIC6.1□□□□□ -1.43
CD44P16070 MIR548D2-201ENST00000384955 97 ntBASIC6.1□□□□□ -1.43
CD44P16070 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CD44P16070 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC6.1□□□□□ -1.43
CD44P16070 AC004941.2-201ENST00000427009 228 ntBASIC6.1□□□□□ -1.43
CD44P16070 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.1□□□□□ -1.43
CD44P16070 AURKAPS2-201ENST00000454983 333 ntBASIC6.1□□□□□ -1.43
CD44P16070 ACA64.1-201ENST00000459171 127 ntBASIC6.1□□□□□ -1.43
CD44P16070 SNRPCP3-201ENST00000474888 476 ntBASIC6.1□□□□□ -1.43
CD44P16070 RNU6-1337P-201ENST00000516525 95 ntBASIC6.1□□□□□ -1.43
CD44P16070 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC6.1□□□□□ -1.43
CD44P16070 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC6.1□□□□□ -1.43
CD44P16070 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.1□□□□□ -1.43
CD44P16070 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC6.1□□□□□ -1.43
CD44P16070 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
CD44P16070 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CD44P16070 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
CD44P16070 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CD44P16070 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC6.1□□□□□ -1.43
CD44P16070 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CD44P16070 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
CD44P16070 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CD44P16070 MIR375-201ENST00000362103 64 ntBASIC6.09□□□□□ -1.43
CD44P16070 SNORD114-7-201ENST00000362520 77 ntBASIC6.09□□□□□ -1.43
CD44P16070 Y_RNA.94-201ENST00000363068 106 ntBASIC6.09□□□□□ -1.43
CD44P16070 Y_RNA.124-201ENST00000363339 93 ntBASIC6.09□□□□□ -1.43
CD44P16070 RNU6-1229P-201ENST00000364295 107 ntBASIC6.09□□□□□ -1.43
CD44P16070 SNORA16A-201ENST00000384342 137 ntBASIC6.09□□□□□ -1.43
CD44P16070 SNORD38C-201ENST00000384381 69 ntBASIC6.09□□□□□ -1.43
CD44P16070 RNU6-938P-201ENST00000411285 103 ntBASIC6.09□□□□□ -1.43
CD44P16070 AC008065.1-201ENST00000428525 348 ntBASIC6.09□□□□□ -1.43
CD44P16070 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CD44P16070 AC090525.1-201ENST00000479116 478 ntBASIC6.09□□□□□ -1.43
CD44P16070 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC6.09□□□□□ -1.43
CD44P16070 ENPP7P11-201ENST00000505915 627 ntBASIC6.09□□□□□ -1.43
CD44P16070 AC114801.3-201ENST00000510231 177 ntBASIC6.09□□□□□ -1.43
CD44P16070 RNU6-615P-201ENST00000516065 106 ntBASIC6.09□□□□□ -1.43
CD44P16070 RNU1-117P-201ENST00000517041 158 ntBASIC6.09□□□□□ -1.43
CD44P16070 MIR3129-201ENST00000581095 76 ntBASIC6.09□□□□□ -1.43
CD44P16070 AC093732.2-201ENST00000607950 274 ntBASIC6.09□□□□□ -1.43
CD44P16070 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CD44P16070 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC6.09□□□□□ -1.43
CD44P16070 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.09□□□□□ -1.43
CD44P16070 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
CD44P16070 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.09□□□□□ -1.44
CD44P16070 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
CD44P16070 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
CD44P16070 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.09□□□□□ -1.44
CD44P16070 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.08□□□□□ -1.44
CD44P16070 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CD44P16070 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CD44P16070 AL353796.1-201ENST00000561542 3241 ntBASIC6.08□□□□□ -1.44
CD44P16070 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CD44P16070 Y_RNA.10-201ENST00000362371 110 ntBASIC6.08□□□□□ -1.44
CD44P16070 RNU6-1099P-201ENST00000363533 107 ntBASIC6.08□□□□□ -1.44
CD44P16070 SNORD56.6-201ENST00000384569 71 ntBASIC6.08□□□□□ -1.44
CD44P16070 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CD44P16070 U3.36-201ENST00000408418 213 ntBASIC6.08□□□□□ -1.44
CD44P16070 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC6.08□□□□□ -1.44
CD44P16070 AL645939.1-201ENST00000453429 797 ntBASIC6.08□□□□□ -1.44
CD44P16070 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CD44P16070 KC877373.1-201ENST00000479066 408 ntBASIC6.08□□□□□ -1.44
CD44P16070 UBE2Q2P9-201ENST00000490086 202 ntBASIC6.08□□□□□ -1.44
CD44P16070 RPL36AP21-201ENST00000490372 323 ntBASIC6.08□□□□□ -1.44
CD44P16070 RNU6-703P-201ENST00000516946 107 ntBASIC6.08□□□□□ -1.44
CD44P16070 SNORA31.23-201ENST00000517219 133 ntBASIC6.08□□□□□ -1.44
CD44P16070 SNORA43.3-201ENST00000517240 103 ntBASIC6.08□□□□□ -1.44
CD44P16070 CKS1BP7-201ENST00000522230 235 ntBASIC6.08□□□□□ -1.44
CD44P16070 AC005363.1-201ENST00000530779 351 ntBASIC6.08□□□□□ -1.44
CD44P16070 MIR7853-201ENST00000584820 132 ntBASIC6.08□□□□□ -1.44
CD44P16070 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.08□□□□□ -1.44
CD44P16070 MIR7109-201ENST00000613748 65 ntBASIC6.08□□□□□ -1.44
CD44P16070 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.08□□□□□ -1.44
CD44P16070 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC6.08□□□□□ -1.44
CD44P16070 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
CD44P16070 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CD44P16070 ADAM3A-203ENST00000461344 2157 ntBASIC6.08□□□□□ -1.44
CD44P16070 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms