Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PDGFAP04085 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDGFAP04085 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PDGFAP04085 SNORA31-201ENST00000362607 130 ntBASIC4.52□□□□□ -1.69
PDGFAP04085 Y_RNA.269-201ENST00000364685 89 ntBASIC4.52□□□□□ -1.69
PDGFAP04085 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDGFAP04085 SNORA70F-201ENST00000384142 135 ntBASIC4.52□□□□□ -1.69
PDGFAP04085 RNU6-541P-201ENST00000384709 110 ntBASIC4.52□□□□□ -1.69
PDGFAP04085 RNA5SP146-201ENST00000410743 123 ntBASIC4.52□□□□□ -1.69
PDGFAP04085 RPL23AP1-201ENST00000428990 471 ntBASIC4.52□□□□□ -1.69
PDGFAP04085 AC007389.2-201ENST00000434630 306 ntBASIC4.52□□□□□ -1.69
PDGFAP04085 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.52□□□□□ -1.69
PDGFAP04085 AP000870.1-201ENST00000472927 406 ntBASIC4.52□□□□□ -1.69
PDGFAP04085 MED28P2-201ENST00000475771 317 ntBASIC4.52□□□□□ -1.69
PDGFAP04085 RN7SL41P-201ENST00000476144 297 ntBASIC4.52□□□□□ -1.69
PDGFAP04085 AF186996.7-201ENST00000492781 209 ntBASIC4.52□□□□□ -1.69
PDGFAP04085 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.52□□□□□ -1.69
PDGFAP04085 SERF1AP1-201ENST00000514575 187 ntBASIC4.52□□□□□ -1.69
PDGFAP04085 RN7SKP122-201ENST00000515923 296 ntBASIC4.52□□□□□ -1.69
PDGFAP04085 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.52□□□□□ -1.69
PDGFAP04085 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.52□□□□□ -1.69
PDGFAP04085 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC4.52□□□□□ -1.69
PDGFAP04085 AC012468.1-201ENST00000604888 430 ntBASIC4.52□□□□□ -1.69
PDGFAP04085 AC019159.1-201ENST00000605094 187 ntBASIC4.52□□□□□ -1.69
PDGFAP04085 MIR6839-201ENST00000620425 113 ntBASIC4.52□□□□□ -1.69
PDGFAP04085 MIR6830-201ENST00000636015 70 ntBASIC4.52□□□□□ -1.69
PDGFAP04085 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDGFAP04085 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.52□□□□□ -1.69
PDGFAP04085 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PDGFAP04085 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDGFAP04085 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.52□□□□□ -1.69
PDGFAP04085 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDGFAP04085 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.51□□□□□ -1.69
PDGFAP04085 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.51□□□□□ -1.69
PDGFAP04085 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDGFAP04085 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDGFAP04085 Y_RNA.180-201ENST00000363867 113 ntBASIC4.51□□□□□ -1.69
PDGFAP04085 RNU6-884P-201ENST00000363889 107 ntBASIC4.51□□□□□ -1.69
PDGFAP04085 RNU1-100P-201ENST00000365255 165 ntBASIC4.51□□□□□ -1.69
PDGFAP04085 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDGFAP04085 RNU6-926P-201ENST00000384075 107 ntBASIC4.51□□□□□ -1.69
PDGFAP04085 SNORA29-201ENST00000384183 140 ntBASIC4.51□□□□□ -1.69
PDGFAP04085 NDUFS5P4-201ENST00000412983 318 ntBASIC4.51□□□□□ -1.69
PDGFAP04085 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
PDGFAP04085 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.51□□□□□ -1.69
PDGFAP04085 AC125238.1-201ENST00000448842 249 ntBASIC4.51□□□□□ -1.69
PDGFAP04085 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.51□□□□□ -1.69
PDGFAP04085 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.51□□□□□ -1.69
PDGFAP04085 SNX18P1Y-201ENST00000616231 511 ntBASIC4.51□□□□□ -1.69
PDGFAP04085 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PDGFAP04085 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDGFAP04085 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDGFAP04085 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.51□□□□□ -1.69
PDGFAP04085 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
PDGFAP04085 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDGFAP04085 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.51□□□□□ -1.69
PDGFAP04085 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDGFAP04085 SNORD56.1-201ENST00000362913 68 ntBASIC4.5□□□□□ -1.69
PDGFAP04085 SNORD32A-201ENST00000364805 84 ntBASIC4.5□□□□□ -1.69
PDGFAP04085 RNU6-318P-201ENST00000384283 103 ntBASIC4.5□□□□□ -1.69
PDGFAP04085 U3.30-201ENST00000391308 210 ntBASIC4.5□□□□□ -1.69
PDGFAP04085 MTHFD2P2-201ENST00000407725 247 ntBASIC4.5□□□□□ -1.69
PDGFAP04085 MIR1298-201ENST00000408783 112 ntBASIC4.5□□□□□ -1.69
PDGFAP04085 AL139156.1-201ENST00000412785 841 ntBASIC4.5□□□□□ -1.69
PDGFAP04085 RPL23AP95-201ENST00000426806 265 ntBASIC4.5□□□□□ -1.69
PDGFAP04085 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.5□□□□□ -1.69
PDGFAP04085 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.5□□□□□ -1.69
PDGFAP04085 AC097462.2-201ENST00000504623 481 ntBASIC4.5□□□□□ -1.69
PDGFAP04085 AC091874.1-201ENST00000511402 339 ntBASIC4.5□□□□□ -1.69
PDGFAP04085 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.5□□□□□ -1.69
PDGFAP04085 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.5□□□□□ -1.69
PDGFAP04085 AP004242.1-201ENST00000533701 349 ntBASIC4.5□□□□□ -1.69
PDGFAP04085 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.5□□□□□ -1.69
PDGFAP04085 CR383656.8-201ENST00000549046 145 ntBASIC4.5□□□□□ -1.69
PDGFAP04085 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.5□□□□□ -1.69
PDGFAP04085 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.5□□□□□ -1.69
PDGFAP04085 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDGFAP04085 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.5□□□□□ -1.69
PDGFAP04085 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDGFAP04085 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
PDGFAP04085 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PDGFAP04085 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.5□□□□□ -1.69
PDGFAP04085 OR56B2P-202ENST00000641377 2453 ntBASIC4.5□□□□□ -1.69
PDGFAP04085 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PDGFAP04085 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
PDGFAP04085 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
PDGFAP04085 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
PDGFAP04085 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PDGFAP04085 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.49□□□□□ -1.69
PDGFAP04085 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PDGFAP04085 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PDGFAP04085 RNU1-140P-201ENST00000365040 165 ntBASIC4.49□□□□□ -1.69
PDGFAP04085 RNU6-102P-201ENST00000384485 104 ntBASIC4.49□□□□□ -1.69
PDGFAP04085 SNORA53-201ENST00000391141 249 ntBASIC4.49□□□□□ -1.69
PDGFAP04085 RPS4XP3-201ENST00000398541 413 ntBASIC4.49□□□□□ -1.69
PDGFAP04085 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.49□□□□□ -1.69
PDGFAP04085 TBCAP2-201ENST00000416175 326 ntBASIC4.49□□□□□ -1.69
PDGFAP04085 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.49□□□□□ -1.69
PDGFAP04085 RPEP3-201ENST00000425462 676 ntBASIC4.49□□□□□ -1.69
PDGFAP04085 AC004975.1-201ENST00000428733 208 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms