Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 SNORA31.1-201ENST00000515993 133 ntBASIC3.37□□□□□ -1.87
MBD3L4A6NDZ8 SNORA31.5-201ENST00000516190 133 ntBASIC3.37□□□□□ -1.87
MBD3L4A6NDZ8 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.37□□□□□ -1.87
MBD3L4A6NDZ8 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.37□□□□□ -1.87
MBD3L4A6NDZ8 MIR4474-201ENST00000579189 78 ntBASIC3.37□□□□□ -1.87
MBD3L4A6NDZ8 AC100830.2-201ENST00000581636 240 ntBASIC3.37□□□□□ -1.87
MBD3L4A6NDZ8 RNU1-30P-201ENST00000606575 163 ntBASIC3.37□□□□□ -1.87
MBD3L4A6NDZ8 AC022140.2-201ENST00000623500 188 ntBASIC3.37□□□□□ -1.87
MBD3L4A6NDZ8 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.37□□□□□ -1.87
MBD3L4A6NDZ8 SCARNA4-202ENST00000625402 129 ntBASIC3.37□□□□□ -1.87
MBD3L4A6NDZ8 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.37□□□□□ -1.87
MBD3L4A6NDZ8 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
MBD3L4A6NDZ8 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
MBD3L4A6NDZ8 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 RNU6-1329P-201ENST00000365664 107 ntBASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 MIR491-201ENST00000384877 84 ntBASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 AL360182.1-201ENST00000397433 468 ntBASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 AL035423.1-201ENST00000420331 213 ntBASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 AL159987.2-201ENST00000432754 307 ntBASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 HMGB3P22-202ENST00000451823 572 ntBASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 AL031183.1-201ENST00000457667 207 ntBASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 AC092436.3-201ENST00000511788 257 ntBASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 RNU6-559P-201ENST00000516151 98 ntBASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 RNU6-711P-201ENST00000517255 106 ntBASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 POLR3GP2-201ENST00000588366 668 ntBASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 AC016727.1-205ENST00000605437 569 ntBASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 AL121917.1-203ENST00000605534 577 ntBASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 AL161629.2-201ENST00000615347 275 ntBASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 PLCE1P1-201ENST00000622094 305 ntBASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
MBD3L4A6NDZ8 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 IPO8P1-201ENST00000455509 3109 ntBASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 UBE3AP2-201ENST00000429033 2259 ntBASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 Y_RNA.11-201ENST00000362375 109 ntBASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 RNU5E-7P-201ENST00000365290 117 ntBASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 Y_RNA.339-201ENST00000365325 102 ntBASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 Y_RNA.387-201ENST00000383918 102 ntBASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 RNU6-95P-201ENST00000384697 107 ntBASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 RNU6-1106P-201ENST00000390845 107 ntBASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 U3.37-201ENST00000408528 213 ntBASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 RN7SKP158-201ENST00000410453 326 ntBASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 RNA5SP31-201ENST00000411144 127 ntBASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 SNORD56-201ENST00000413522 71 ntBASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 HMGN2P31-201ENST00000432430 273 ntBASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 CYCSP32-201ENST00000440548 321 ntBASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 AC098831.1-201ENST00000440661 216 ntBASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 RPL23AP45-201ENST00000476406 468 ntBASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 HMGN2P13-201ENST00000476476 274 ntBASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 RN7SKP18-201ENST00000516005 275 ntBASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 SNORA70.24-201ENST00000517233 118 ntBASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 AP004607.1-201ENST00000524456 203 ntBASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 AC069240.1-201ENST00000548774 375 ntBASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 AL451007.1-201ENST00000595491 289 ntBASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 AP000787.2-201ENST00000604432 568 ntBASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 SNORA62.6-201ENST00000606322 83 ntBASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 AC064836.2-201ENST00000609491 462 ntBASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 AC010378.1-201ENST00000619270 362 ntBASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
MBD3L4A6NDZ8 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 LINC02471-203ENST00000641941 4752 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms