Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
PCDHGC4Q9Y5F7 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGC4Q9Y5F7 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGC4Q9Y5F7 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDHGC4Q9Y5F7 AC100821.1-201ENST00000523153 2479 ntBASIC4.75□□□□□ -1.65
PCDHGC4Q9Y5F7 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
PCDHGC4Q9Y5F7 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.75□□□□□ -1.65
PCDHGC4Q9Y5F7 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGC4Q9Y5F7 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGC4Q9Y5F7 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.75□□□□□ -1.65
PCDHGC4Q9Y5F7 RNU6-78P-201ENST00000362897 107 ntBASIC4.75□□□□□ -1.65
PCDHGC4Q9Y5F7 RNU4-56P-201ENST00000364700 142 ntBASIC4.75□□□□□ -1.65
PCDHGC4Q9Y5F7 RNU6-1175P-201ENST00000365200 107 ntBASIC4.75□□□□□ -1.65
PCDHGC4Q9Y5F7 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGC4Q9Y5F7 MIR141-201ENST00000384975 95 ntBASIC4.75□□□□□ -1.65
PCDHGC4Q9Y5F7 AL357139.1-201ENST00000407792 426 ntBASIC4.75□□□□□ -1.65
PCDHGC4Q9Y5F7 RAB9AP3-201ENST00000412737 573 ntBASIC4.75□□□□□ -1.65
PCDHGC4Q9Y5F7 COX6B1P7-201ENST00000430845 235 ntBASIC4.75□□□□□ -1.65
PCDHGC4Q9Y5F7 AL589765.3-201ENST00000446084 462 ntBASIC4.75□□□□□ -1.65
PCDHGC4Q9Y5F7 RAB9AP1-201ENST00000449393 573 ntBASIC4.75□□□□□ -1.65
PCDHGC4Q9Y5F7 RPL23AP3-201ENST00000453844 468 ntBASIC4.75□□□□□ -1.65
PCDHGC4Q9Y5F7 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
PCDHGC4Q9Y5F7 RN7SKP49-201ENST00000516675 260 ntBASIC4.75□□□□□ -1.65
PCDHGC4Q9Y5F7 AL110118.1-201ENST00000553543 400 ntBASIC4.75□□□□□ -1.65
PCDHGC4Q9Y5F7 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC4.75□□□□□ -1.65
PCDHGC4Q9Y5F7 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.75□□□□□ -1.65
PCDHGC4Q9Y5F7 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.75□□□□□ -1.65
PCDHGC4Q9Y5F7 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGC4Q9Y5F7 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGC4Q9Y5F7 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGC4Q9Y5F7 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
PCDHGC4Q9Y5F7 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGC4Q9Y5F7 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGC4Q9Y5F7 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
PCDHGC4Q9Y5F7 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGC4Q9Y5F7 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
PCDHGC4Q9Y5F7 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.74□□□□□ -1.65
PCDHGC4Q9Y5F7 RNU6-961P-201ENST00000363893 105 ntBASIC4.74□□□□□ -1.65
PCDHGC4Q9Y5F7 RNU6-215P-201ENST00000365169 102 ntBASIC4.74□□□□□ -1.65
PCDHGC4Q9Y5F7 Y_RNA.331-201ENST00000365267 102 ntBASIC4.74□□□□□ -1.65
PCDHGC4Q9Y5F7 MIR298-201ENST00000401212 88 ntBASIC4.74□□□□□ -1.65
PCDHGC4Q9Y5F7 CTSL3P-202ENST00000412179 788 ntBASIC4.74□□□□□ -1.65
PCDHGC4Q9Y5F7 FAR2P2-201ENST00000413041 594 ntBASIC4.74□□□□□ -1.65
PCDHGC4Q9Y5F7 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDHGC4Q9Y5F7 AC096638.1-201ENST00000444678 216 ntBASIC4.74□□□□□ -1.65
PCDHGC4Q9Y5F7 H2AFZP5-201ENST00000446960 382 ntBASIC4.74□□□□□ -1.65
PCDHGC4Q9Y5F7 NUTF2P7-201ENST00000453086 375 ntBASIC4.74□□□□□ -1.65
PCDHGC4Q9Y5F7 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.74□□□□□ -1.65
PCDHGC4Q9Y5F7 AC092798.1-201ENST00000458542 409 ntBASIC4.74□□□□□ -1.65
PCDHGC4Q9Y5F7 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.74□□□□□ -1.65
PCDHGC4Q9Y5F7 MIR4782-201ENST00000577987 79 ntBASIC4.74□□□□□ -1.65
PCDHGC4Q9Y5F7 MIR4330-201ENST00000579077 105 ntBASIC4.74□□□□□ -1.65
PCDHGC4Q9Y5F7 AC005296.1-201ENST00000616145 209 ntBASIC4.74□□□□□ -1.65
PCDHGC4Q9Y5F7 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.74□□□□□ -1.65
PCDHGC4Q9Y5F7 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC4.74□□□□□ -1.65
PCDHGC4Q9Y5F7 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.74□□□□□ -1.65
PCDHGC4Q9Y5F7 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGC4Q9Y5F7 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGC4Q9Y5F7 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGC4Q9Y5F7 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 RNVU1-6-201ENST00000364688 164 ntBASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 Y_RNA.353-201ENST00000365440 108 ntBASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 RNU6-44P-201ENST00000384045 107 ntBASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 Y_RNA.571-201ENST00000384753 98 ntBASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 MIR153-1-201ENST00000384914 90 ntBASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 AC008267.6-201ENST00000441664 139 ntBASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 HMGB3P3-201ENST00000510526 400 ntBASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 RNU6-426P-201ENST00000516464 97 ntBASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 RNU6-572P-201ENST00000516724 80 ntBASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 RNA5SP290-201ENST00000517133 127 ntBASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 MIR5692C2-201ENST00000577959 77 ntBASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 RN7SL52P-201ENST00000584271 284 ntBASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 SNORD84-203ENST00000584275 78 ntBASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 RN7SL722P-201ENST00000617780 284 ntBASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 RN7SL565P-201ENST00000618246 284 ntBASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 SALL4P2-201ENST00000423288 2910 ntBASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.73□□□□□ -1.65
PCDHGC4Q9Y5F7 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGC4Q9Y5F7 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
PCDHGC4Q9Y5F7 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PCDHGC4Q9Y5F7 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGC4Q9Y5F7 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
PCDHGC4Q9Y5F7 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms