Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 RNU1-57P-201ENST00000384491 166 ntBASIC0.6□□□□□ -2.31
AP4S1Q9Y587 ATP5F1P6-201ENST00000402768 767 ntBASIC0.6□□□□□ -2.31
AP4S1Q9Y587 PIGFP2-201ENST00000421400 651 ntBASIC0.6□□□□□ -2.31
AP4S1Q9Y587 AC018630.2-202ENST00000422992 927 ntBASIC0.6□□□□□ -2.31
AP4S1Q9Y587 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.6□□□□□ -2.31
AP4S1Q9Y587 MTCO1P44-201ENST00000441935 243 ntBASIC0.6□□□□□ -2.31
AP4S1Q9Y587 HMGN3P1-201ENST00000453847 193 ntBASIC0.6□□□□□ -2.31
AP4S1Q9Y587 RPS27AP10-201ENST00000496103 208 ntBASIC0.6□□□□□ -2.31
AP4S1Q9Y587 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC0.6□□□□□ -2.31
AP4S1Q9Y587 SNORD116-28-201ENST00000516123 91 ntBASIC0.6□□□□□ -2.31
AP4S1Q9Y587 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.6□□□□□ -2.31
AP4S1Q9Y587 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC0.6□□□□□ -2.31
AP4S1Q9Y587 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.6□□□□□ -2.31
AP4S1Q9Y587 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.6□□□□□ -2.31
AP4S1Q9Y587 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.6□□□□□ -2.31
AP4S1Q9Y587 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC0.6□□□□□ -2.31
AP4S1Q9Y587 BNIP3P27-201ENST00000599991 412 ntBASIC0.6□□□□□ -2.31
AP4S1Q9Y587 AC069304.2-201ENST00000605154 435 ntBASIC0.6□□□□□ -2.31
AP4S1Q9Y587 AC016542.1-201ENST00000608259 493 ntBASIC0.6□□□□□ -2.31
AP4S1Q9Y587 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.6□□□□□ -2.31
AP4S1Q9Y587 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
AP4S1Q9Y587 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.59□□□□□ -2.31
AP4S1Q9Y587 RNU6-741P-201ENST00000383889 107 ntBASIC0.59□□□□□ -2.31
AP4S1Q9Y587 MIR29C-201ENST00000385231 88 ntBASIC0.59□□□□□ -2.31
AP4S1Q9Y587 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
AP4S1Q9Y587 POLR2J4-204ENST00000418424 324 ntBASIC0.59□□□□□ -2.31
AP4S1Q9Y587 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.59□□□□□ -2.31
AP4S1Q9Y587 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC0.59□□□□□ -2.31
AP4S1Q9Y587 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.59□□□□□ -2.31
AP4S1Q9Y587 AP001324.2-201ENST00000461163 319 ntBASIC0.59□□□□□ -2.31
AP4S1Q9Y587 AC114982.1-201ENST00000469402 321 ntBASIC0.59□□□□□ -2.31
AP4S1Q9Y587 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.59□□□□□ -2.31
AP4S1Q9Y587 AC025465.3-201ENST00000510570 311 ntBASIC0.59□□□□□ -2.31
AP4S1Q9Y587 RN7SKP219-201ENST00000516825 296 ntBASIC0.59□□□□□ -2.31
AP4S1Q9Y587 SNORA31.22-201ENST00000517204 135 ntBASIC0.59□□□□□ -2.31
AP4S1Q9Y587 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.31
AP4S1Q9Y587 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC0.59□□□□□ -2.31
AP4S1Q9Y587 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
AP4S1Q9Y587 CYCSP27-201ENST00000527643 293 ntBASIC0.59□□□□□ -2.31
AP4S1Q9Y587 AC124293.1-201ENST00000530034 493 ntBASIC0.59□□□□□ -2.31
AP4S1Q9Y587 LSM6P2-201ENST00000552208 177 ntBASIC0.59□□□□□ -2.31
AP4S1Q9Y587 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.59□□□□□ -2.31
AP4S1Q9Y587 VN1R80P-201ENST00000597126 338 ntBASIC0.59□□□□□ -2.31
AP4S1Q9Y587 AC073544.2-201ENST00000601155 540 ntBASIC0.59□□□□□ -2.31
AP4S1Q9Y587 AC097468.3-201ENST00000607956 456 ntBASIC0.59□□□□□ -2.31
AP4S1Q9Y587 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.59□□□□□ -2.32
AP4S1Q9Y587 SNORD1A-201ENST00000364968 72 ntBASIC0.58□□□□□ -2.32
AP4S1Q9Y587 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.58□□□□□ -2.32
AP4S1Q9Y587 AC078974.1-201ENST00000411597 223 ntBASIC0.58□□□□□ -2.32
AP4S1Q9Y587 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.58□□□□□ -2.32
AP4S1Q9Y587 AC009518.2-201ENST00000418056 731 ntBASIC0.58□□□□□ -2.32
AP4S1Q9Y587 AC004941.2-201ENST00000427009 228 ntBASIC0.58□□□□□ -2.32
AP4S1Q9Y587 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC0.58□□□□□ -2.32
AP4S1Q9Y587 NANOGP2-201ENST00000435391 727 ntBASIC0.58□□□□□ -2.32
AP4S1Q9Y587 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.58□□□□□ -2.32
AP4S1Q9Y587 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.58□□□□□ -2.32
AP4S1Q9Y587 KATNBL1P6-201ENST00000453433 915 ntBASIC0.58□□□□□ -2.32
AP4S1Q9Y587 DUXAP8-207ENST00000456786 622 ntBASIC0.58□□□□□ -2.32
AP4S1Q9Y587 SNORA25.11-201ENST00000515935 105 ntBASIC0.58□□□□□ -2.32
AP4S1Q9Y587 SCARNA16.2-201ENST00000516520 172 ntBASIC0.58□□□□□ -2.32
AP4S1Q9Y587 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.58□□□□□ -2.32
AP4S1Q9Y587 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.58□□□□□ -2.32
AP4S1Q9Y587 AC015712.3-201ENST00000559380 164 ntBASIC0.58□□□□□ -2.32
AP4S1Q9Y587 SNORA77B-201ENST00000578179 125 ntBASIC0.58□□□□□ -2.32
AP4S1Q9Y587 AC108706.1-201ENST00000611053 297 ntBASIC0.58□□□□□ -2.32
AP4S1Q9Y587 AC008121.3-201ENST00000618726 433 ntBASIC0.58□□□□□ -2.32
AP4S1Q9Y587 MIR764-201ENST00000390811 85 ntBASIC0.57□□□□□ -2.32
AP4S1Q9Y587 AL109755.1-201ENST00000401791 649 ntBASIC0.57□□□□□ -2.32
AP4S1Q9Y587 BEND7P1-201ENST00000422058 457 ntBASIC0.57□□□□□ -2.32
AP4S1Q9Y587 CST2P1-201ENST00000425770 87 ntBASIC0.57□□□□□ -2.32
AP4S1Q9Y587 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.57□□□□□ -2.32
AP4S1Q9Y587 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC0.57□□□□□ -2.32
AP4S1Q9Y587 AC114982.2-201ENST00000461396 358 ntBASIC0.57□□□□□ -2.32
AP4S1Q9Y587 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.57□□□□□ -2.32
AP4S1Q9Y587 AL163540.1-201ENST00000485382 386 ntBASIC0.57□□□□□ -2.32
AP4S1Q9Y587 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC0.57□□□□□ -2.32
AP4S1Q9Y587 PSMC1P5-201ENST00000512850 177 ntBASIC0.57□□□□□ -2.32
AP4S1Q9Y587 AC022483.1-201ENST00000514020 567 ntBASIC0.57□□□□□ -2.32
AP4S1Q9Y587 SNORA48.9-201ENST00000516419 162 ntBASIC0.57□□□□□ -2.32
AP4S1Q9Y587 SNORD19.2-201ENST00000516978 73 ntBASIC0.57□□□□□ -2.32
AP4S1Q9Y587 AC104997.1-201ENST00000519761 717 ntBASIC0.57□□□□□ -2.32
AP4S1Q9Y587 CR383656.7-201ENST00000548164 174 ntBASIC0.57□□□□□ -2.32
AP4S1Q9Y587 BNIP3P23-201ENST00000599655 511 ntBASIC0.57□□□□□ -2.32
AP4S1Q9Y587 AL671309.1-201ENST00000603750 544 ntBASIC0.57□□□□□ -2.32
AP4S1Q9Y587 AC136601.2-201ENST00000604356 474 ntBASIC0.57□□□□□ -2.32
AP4S1Q9Y587 ELOCP5-201ENST00000604924 333 ntBASIC0.57□□□□□ -2.32
AP4S1Q9Y587 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC0.57□□□□□ -2.32
AP4S1Q9Y587 AC073569.3-201ENST00000619055 682 ntBASIC0.57□□□□□ -2.32
AP4S1Q9Y587 MIR6835-201ENST00000621552 64 ntBASIC0.57□□□□□ -2.32
AP4S1Q9Y587 AC091965.5-201ENST00000624785 342 ntBASIC0.57□□□□□ -2.32
AP4S1Q9Y587 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.57□□□□□ -2.32
AP4S1Q9Y587 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.57□□□□□ -2.32
AP4S1Q9Y587 MIR3199-2-201ENST00000636243 86 ntBASIC0.57□□□□□ -2.32
AP4S1Q9Y587 AC083865.1-201ENST00000636634 831 ntBASIC0.57□□□□□ -2.32
AP4S1Q9Y587 AC017104.5-201ENST00000637647 639 ntBASIC0.57□□□□□ -2.32
AP4S1Q9Y587 Z75746.1-201ENST00000440243 2080 ntBASIC0.57□□□□□ -2.32
AP4S1Q9Y587 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
AP4S1Q9Y587 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
AP4S1Q9Y587 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.56□□□□□ -2.32
AP4S1Q9Y587 RNU6-670P-201ENST00000364312 104 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms