Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 NDUFA5P6-201ENST00000542110 379 ntBASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 AC079598.5-201ENST00000547460 117 ntBASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 UBE2L4-201ENST00000587688 464 ntBASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 BBIP1P1-201ENST00000602999 279 ntBASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 AL161798.1-201ENST00000604630 131 ntBASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 AC008121.3-201ENST00000618726 433 ntBASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 AC097460.3-201ENST00000623099 442 ntBASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 AC017037.3-201ENST00000625016 472 ntBASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 AC092192.1-201ENST00000633154 1018 ntBASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 U8.1-201ENST00000362843 134 ntBASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 RNU1-23P-201ENST00000363361 144 ntBASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 RNU6-432P-201ENST00000384196 109 ntBASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 CISD1P1-201ENST00000393907 327 ntBASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 USP9YP6-201ENST00000413550 854 ntBASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 MTND2P20-201ENST00000440805 661 ntBASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 SNRPGP13-201ENST00000442212 177 ntBASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 MTCO3P45-201ENST00000443036 613 ntBASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 AC020550.1-201ENST00000447385 163 ntBASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 KATNBL1P6-201ENST00000453433 915 ntBASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 AC112771.1-201ENST00000463581 102 ntBASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 AC011005.2-201ENST00000487324 359 ntBASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 AC110760.3-202ENST00000515177 371 ntBASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 RNU6-390P-201ENST00000516259 103 ntBASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 SNORA48.9-201ENST00000516419 162 ntBASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 RNU6-548P-201ENST00000517083 115 ntBASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 AC015720.1-201ENST00000565251 277 ntBASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 SNRPGP17-201ENST00000603780 214 ntBASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 CDR1-202ENST00000625883 1485 ntBASIC1.37□□□□□ -2.19
VPS29Q9UBQ0 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
VPS29Q9UBQ0 RNU6-223P-201ENST00000362830 107 ntBASIC1.36□□□□□ -2.19
VPS29Q9UBQ0 RNU4-13P-201ENST00000364019 141 ntBASIC1.36□□□□□ -2.19
VPS29Q9UBQ0 EIF4EP2-201ENST00000422816 654 ntBASIC1.36□□□□□ -2.19
VPS29Q9UBQ0 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.36□□□□□ -2.19
VPS29Q9UBQ0 MTCO1P3-201ENST00000429327 192 ntBASIC1.36□□□□□ -2.19
VPS29Q9UBQ0 GPM6BP2-201ENST00000432046 144 ntBASIC1.36□□□□□ -2.19
VPS29Q9UBQ0 MTND4P6-201ENST00000438297 472 ntBASIC1.36□□□□□ -2.19
VPS29Q9UBQ0 MTCO3P43-201ENST00000440974 771 ntBASIC1.36□□□□□ -2.19
VPS29Q9UBQ0 AL158053.1-201ENST00000441503 453 ntBASIC1.36□□□□□ -2.19
VPS29Q9UBQ0 GPM6BP1-201ENST00000446387 144 ntBASIC1.36□□□□□ -2.19
VPS29Q9UBQ0 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
VPS29Q9UBQ0 TPRKBP1-201ENST00000456243 481 ntBASIC1.36□□□□□ -2.19
VPS29Q9UBQ0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.36□□□□□ -2.19
VPS29Q9UBQ0 RNA5SP57-201ENST00000459463 123 ntBASIC1.36□□□□□ -2.19
VPS29Q9UBQ0 AC026414.1-201ENST00000504046 698 ntBASIC1.36□□□□□ -2.19
VPS29Q9UBQ0 AC021146.2-201ENST00000504736 556 ntBASIC1.36□□□□□ -2.19
VPS29Q9UBQ0 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.36□□□□□ -2.19
VPS29Q9UBQ0 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
VPS29Q9UBQ0 AP004607.1-201ENST00000524456 203 ntBASIC1.36□□□□□ -2.19
VPS29Q9UBQ0 SLC2A13P1-201ENST00000531560 322 ntBASIC1.36□□□□□ -2.19
VPS29Q9UBQ0 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.36□□□□□ -2.19
VPS29Q9UBQ0 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.36□□□□□ -2.19
VPS29Q9UBQ0 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.36□□□□□ -2.19
VPS29Q9UBQ0 HIGD1AP17-201ENST00000554576 276 ntBASIC1.36□□□□□ -2.19
VPS29Q9UBQ0 MIR3198-2-201ENST00000577868 80 ntBASIC1.36□□□□□ -2.19
VPS29Q9UBQ0 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.36□□□□□ -2.19
VPS29Q9UBQ0 AC091057.3-201ENST00000602684 733 ntBASIC1.36□□□□□ -2.19
VPS29Q9UBQ0 AC098826.3-201ENST00000603823 466 ntBASIC1.36□□□□□ -2.19
VPS29Q9UBQ0 AC241585.2-209ENST00000638217 143 ntBASIC1.36□□□□□ -2.19
VPS29Q9UBQ0 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
VPS29Q9UBQ0 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.36□□□□□ -2.19
VPS29Q9UBQ0 CDC27P3-201ENST00000635418 1910 ntBASIC1.35□□□□□ -2.19
VPS29Q9UBQ0 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
VPS29Q9UBQ0 NACAP2-201ENST00000318548 624 ntBASIC1.35□□□□□ -2.19
VPS29Q9UBQ0 AL161781.1-201ENST00000354277 403 ntBASIC1.35□□□□□ -2.19
VPS29Q9UBQ0 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
VPS29Q9UBQ0 AC068050.1-201ENST00000394891 380 ntBASIC1.35□□□□□ -2.19
VPS29Q9UBQ0 AC127391.1-201ENST00000411737 98 ntBASIC1.35□□□□□ -2.19
VPS29Q9UBQ0 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.35□□□□□ -2.19
VPS29Q9UBQ0 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.35□□□□□ -2.19
VPS29Q9UBQ0 VN1R108P-201ENST00000431580 830 ntBASIC1.35□□□□□ -2.19
VPS29Q9UBQ0 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.35□□□□□ -2.19
VPS29Q9UBQ0 HMGB1P18-201ENST00000438801 619 ntBASIC1.35□□□□□ -2.19
VPS29Q9UBQ0 AL360221.1-201ENST00000445989 335 ntBASIC1.35□□□□□ -2.19
VPS29Q9UBQ0 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.35□□□□□ -2.19
VPS29Q9UBQ0 OR6C5P-201ENST00000452388 923 ntBASIC1.35□□□□□ -2.19
VPS29Q9UBQ0 FABP5P15-201ENST00000453566 214 ntBASIC1.35□□□□□ -2.19
VPS29Q9UBQ0 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms