Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC005019.1-201ENST00000436455 431 ntBASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 USP9YP8-201ENST00000441913 500 ntBASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 RNU7-138P-201ENST00000459479 64 ntBASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 RNU6-329P-201ENST00000459618 107 ntBASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 RN7SL132P-201ENST00000478131 296 ntBASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 HMGN1P11-201ENST00000508668 303 ntBASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 RNU6-273P-201ENST00000516937 96 ntBASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 IGKV2-23-201ENST00000518729 323 ntBASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 AC006199.1-201ENST00000548728 219 ntBASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 AC025423.5-201ENST00000550230 219 ntBASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 SCOCP1-201ENST00000554676 349 ntBASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 AL121821.2-201ENST00000556081 394 ntBASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 MIR4742-201ENST00000581069 85 ntBASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 UBE2V2P2-201ENST00000587677 504 ntBASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 OR1M4P-201ENST00000589199 287 ntBASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 AC091167.4-201ENST00000605079 184 ntBASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 AC011890.2-201ENST00000613393 294 ntBASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 Z69720.2-201ENST00000624755 279 ntBASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 CDC27P3-201ENST00000635418 1910 ntBASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 MIR372-201ENST00000362225 67 ntBASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 RAB9AP3-201ENST00000412737 573 ntBASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 VN1R36P-201ENST00000414936 291 ntBASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 RAB9AP1-201ENST00000449393 573 ntBASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 AC092001.1-201ENST00000453012 261 ntBASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 PPP1R2P5-201ENST00000457256 603 ntBASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 AC104472.2-201ENST00000469035 601 ntBASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 RPL7P47-201ENST00000497299 556 ntBASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 TRBVA-201ENST00000498804 316 ntBASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 RNU6-864P-201ENST00000516256 108 ntBASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 RNA5SP164-201ENST00000516533 110 ntBASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 RNU6-1332P-201ENST00000516666 104 ntBASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 RNU6-256P-201ENST00000516747 97 ntBASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 RNU7-30P-201ENST00000516835 62 ntBASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 AC022634.1-201ENST00000520765 532 ntBASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 AC005498.1-201ENST00000592125 465 ntBASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 AC020895.1-201ENST00000595362 272 ntBASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 AC008121.1-201ENST00000603244 268 ntBASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 AL606490.9-201ENST00000603331 271 ntBASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 AC104260.1-201ENST00000616660 539 ntBASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 RPS4XP5-202ENST00000449995 1334 ntBASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
LIN7CQ9NUP9 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 MTND4P12-201ENST00000498999 1377 ntBASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 Y_RNA.70-201ENST00000362886 110 ntBASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 RNU5E-4P-201ENST00000364931 120 ntBASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 RNU6-1280P-201ENST00000365211 107 ntBASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 RNA5SP283-201ENST00000365604 119 ntBASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 CD24P4-201ENST00000382840 243 ntBASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 SNORA57.1-201ENST00000391227 145 ntBASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 AL096701.2-201ENST00000416920 238 ntBASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 PDCL2P1-201ENST00000419302 352 ntBASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 AC245291.1-201ENST00000419501 328 ntBASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 AC093151.1-201ENST00000427711 313 ntBASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 MTND4LP16-201ENST00000440828 295 ntBASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 HIGD1AP2-201ENST00000446367 280 ntBASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 AC125238.1-201ENST00000448842 249 ntBASIC3.13□□□□□ -1.91
LIN7CQ9NUP9 RPL23AP14-201ENST00000468281 468 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms