Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC063943.3-201ENST00000615562 356 ntBASIC3.8□□□□□ -1.8
HPS3Q969F9 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.8□□□□□ -1.8
HPS3Q969F9 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HPS3Q969F9 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
HPS3Q969F9 AC093010.3-201ENST00000570269 15214 ntBASIC3.8□□□□□ -1.8
HPS3Q969F9 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.79□□□□□ -1.8
HPS3Q969F9 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HPS3Q969F9 RNU6-522P-201ENST00000364497 107 ntBASIC3.79□□□□□ -1.8
HPS3Q969F9 RNU5E-4P-201ENST00000364931 120 ntBASIC3.79□□□□□ -1.8
HPS3Q969F9 SNORA32.2-201ENST00000384049 122 ntBASIC3.79□□□□□ -1.8
HPS3Q969F9 RNU6-767P-201ENST00000384132 107 ntBASIC3.79□□□□□ -1.8
HPS3Q969F9 Y_RNA.480-201ENST00000384364 102 ntBASIC3.79□□□□□ -1.8
HPS3Q969F9 Y_RNA.530-201ENST00000384587 101 ntBASIC3.79□□□□□ -1.8
HPS3Q969F9 MIR184-201ENST00000384962 84 ntBASIC3.79□□□□□ -1.8
HPS3Q969F9 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HPS3Q969F9 RPS4XP7-201ENST00000406274 780 ntBASIC3.79□□□□□ -1.8
HPS3Q969F9 AC093578.1-201ENST00000415219 368 ntBASIC3.79□□□□□ -1.8
HPS3Q969F9 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.79□□□□□ -1.8
HPS3Q969F9 RPL35AP12-201ENST00000425362 338 ntBASIC3.79□□□□□ -1.8
HPS3Q969F9 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.79□□□□□ -1.8
HPS3Q969F9 HMGN2P31-201ENST00000432430 273 ntBASIC3.79□□□□□ -1.8
HPS3Q969F9 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.79□□□□□ -1.8
HPS3Q969F9 SSXP4-201ENST00000451349 245 ntBASIC3.79□□□□□ -1.8
HPS3Q969F9 RBMY2UP-201ENST00000453474 324 ntBASIC3.79□□□□□ -1.8
HPS3Q969F9 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.79□□□□□ -1.8
HPS3Q969F9 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.79□□□□□ -1.8
HPS3Q969F9 AC110768.1-201ENST00000509222 400 ntBASIC3.79□□□□□ -1.8
HPS3Q969F9 Y_RNA.665-201ENST00000516177 98 ntBASIC3.79□□□□□ -1.8
HPS3Q969F9 RNU6-1314P-201ENST00000517139 104 ntBASIC3.79□□□□□ -1.8
HPS3Q969F9 AC005476.1-201ENST00000554427 397 ntBASIC3.79□□□□□ -1.8
HPS3Q969F9 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.79□□□□□ -1.8
HPS3Q969F9 MTCO3P23-201ENST00000561363 289 ntBASIC3.79□□□□□ -1.8
HPS3Q969F9 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.79□□□□□ -1.8
HPS3Q969F9 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.79□□□□□ -1.8
HPS3Q969F9 AL160281.1-201ENST00000605307 311 ntBASIC3.79□□□□□ -1.8
HPS3Q969F9 RMST_8.1-201ENST00000610287 165 ntBASIC3.79□□□□□ -1.8
HPS3Q969F9 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HPS3Q969F9 AC068831.7-201ENST00000616954 363 ntBASIC3.79□□□□□ -1.8
HPS3Q969F9 AC103705.1-201ENST00000619013 241 ntBASIC3.79□□□□□ -1.8
HPS3Q969F9 PLCE1P1-201ENST00000622094 305 ntBASIC3.79□□□□□ -1.8
HPS3Q969F9 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.79□□□□□ -1.8
HPS3Q969F9 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.79□□□□□ -1.8
HPS3Q969F9 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
HPS3Q969F9 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HPS3Q969F9 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
HPS3Q969F9 AC121333.1-201ENST00000567488 2709 ntBASIC3.79□□□□□ -1.8
HPS3Q969F9 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.78□□□□□ -1.8
HPS3Q969F9 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
HPS3Q969F9 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.78□□□□□ -1.8
HPS3Q969F9 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.78□□□□□ -1.8
HPS3Q969F9 MTND4P12-201ENST00000498999 1377 ntBASIC3.78□□□□□ -1.8
HPS3Q969F9 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HPS3Q969F9 MIR412-201ENST00000362142 91 ntBASIC3.78□□□□□ -1.8
HPS3Q969F9 EIF4E2P1-201ENST00000393781 255 ntBASIC3.78□□□□□ -1.8
HPS3Q969F9 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.78□□□□□ -1.8
HPS3Q969F9 AP000907.1-201ENST00000428428 510 ntBASIC3.78□□□□□ -1.8
HPS3Q969F9 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.78□□□□□ -1.8
HPS3Q969F9 RPL12P25-201ENST00000455592 494 ntBASIC3.78□□□□□ -1.8
HPS3Q969F9 DYNLL1P5-201ENST00000467158 270 ntBASIC3.78□□□□□ -1.8
HPS3Q969F9 RPL21P93-201ENST00000480465 489 ntBASIC3.78□□□□□ -1.8
HPS3Q969F9 AC008628.2-201ENST00000502605 298 ntBASIC3.78□□□□□ -1.8
HPS3Q969F9 AC009901.1-201ENST00000506703 541 ntBASIC3.78□□□□□ -1.8
HPS3Q969F9 AC010265.1-201ENST00000513509 211 ntBASIC3.78□□□□□ -1.8
HPS3Q969F9 AC046134.1-201ENST00000514454 666 ntBASIC3.78□□□□□ -1.8
HPS3Q969F9 AC112206.3-201ENST00000514578 389 ntBASIC3.78□□□□□ -1.8
HPS3Q969F9 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.78□□□□□ -1.8
HPS3Q969F9 SNORA70.19-201ENST00000516717 90 ntBASIC3.78□□□□□ -1.8
HPS3Q969F9 SNORA70.24-201ENST00000517233 118 ntBASIC3.78□□□□□ -1.8
HPS3Q969F9 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.78□□□□□ -1.8
HPS3Q969F9 BTF3P12-201ENST00000519620 469 ntBASIC3.78□□□□□ -1.8
HPS3Q969F9 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.78□□□□□ -1.8
HPS3Q969F9 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.78□□□□□ -1.8
HPS3Q969F9 AP000763.2-201ENST00000540641 163 ntBASIC3.78□□□□□ -1.8
HPS3Q969F9 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.78□□□□□ -1.8
HPS3Q969F9 HIGD1AP1-201ENST00000550979 275 ntBASIC3.78□□□□□ -1.8
HPS3Q969F9 TGIF1P1-201ENST00000558095 802 ntBASIC3.78□□□□□ -1.8
HPS3Q969F9 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.78□□□□□ -1.8
HPS3Q969F9 AMZ2P1-203ENST00000565833 850 ntBASIC3.78□□□□□ -1.8
HPS3Q969F9 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.78□□□□□ -1.8
HPS3Q969F9 UBE2V2P2-201ENST00000587677 504 ntBASIC3.78□□□□□ -1.8
HPS3Q969F9 VN1R80P-201ENST00000597126 338 ntBASIC3.78□□□□□ -1.8
HPS3Q969F9 AL355598.1-201ENST00000604169 202 ntBASIC3.78□□□□□ -1.8
HPS3Q969F9 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HPS3Q969F9 U3.45-201ENST00000607547 219 ntBASIC3.78□□□□□ -1.8
HPS3Q969F9 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.78□□□□□ -1.8
HPS3Q969F9 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.78□□□□□ -1.8
HPS3Q969F9 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
HPS3Q969F9 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HPS3Q969F9 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
HPS3Q969F9 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.77□□□□□ -1.81
HPS3Q969F9 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.77□□□□□ -1.81
HPS3Q969F9 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
HPS3Q969F9 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.77□□□□□ -1.81
HPS3Q969F9 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HPS3Q969F9 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HPS3Q969F9 RPS29P4-201ENST00000414733 161 ntBASIC3.77□□□□□ -1.81
HPS3Q969F9 USP9YP20-201ENST00000419224 558 ntBASIC3.77□□□□□ -1.81
HPS3Q969F9 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.77□□□□□ -1.81
HPS3Q969F9 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.77□□□□□ -1.81
HPS3Q969F9 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms