Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC105313.1-201ENST00000509121 353 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 RNU6-27P-201ENST00000516146 107 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 RNA5SP291-201ENST00000517222 105 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC093519.1-201ENST00000566109 298 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 RNU6-741P-201ENST00000383889 107 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 FGF7P5-201ENST00000441829 291 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 COX6CP14-201ENST00000469580 174 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 SNORA76.2-201ENST00000517095 137 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC124293.1-201ENST00000530034 493 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 MIR3973-201ENST00000579824 107 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 OR5H6-203ENST00000642105 978 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AL359854.1-201ENST00000614203 1594 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 Y_RNA.280-201ENST00000364765 112 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC118469.1-201ENST00000442943 488 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC245102.2-201ENST00000448956 180 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AL442644.1-201ENST00000454390 3105 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 SGO1P1-201ENST00000603525 1447 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC083799.1-201ENST00000366451 910 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 RNU1-78P-201ENST00000391248 165 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 SEPT7P5-201ENST00000434048 306 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 RPL18AP17-201ENST00000455326 198 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 RNA5SP135-201ENST00000517019 125 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC023824.3-201ENST00000569003 562 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AP005229.2-201ENST00000609980 697 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 MIR409-201ENST00000362237 79 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 CR848007.2-201ENST00000424918 787 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AL500527.1-201ENST00000448532 255 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 RNU6-222P-201ENST00000362438 107 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 USP9YP33-201ENST00000412220 421 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 YWHAZP8-201ENST00000436935 731 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AL714022.1-201ENST00000439897 151 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC116337.2-201ENST00000477662 156 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC084024.2-201ENST00000503480 791 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC091860.1-201ENST00000505723 432 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 MIR3618-201ENST00000580330 88 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AL050343.2-201ENST00000607338 280 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AL138478.1-201ENST00000612252 832 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC126177.8-201ENST00000618339 1015 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 SNORD33-201ENST00000362761 85 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 RNU6-792P-201ENST00000363490 107 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 RNU4-91P-201ENST00000364778 135 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 RNA5SP56-201ENST00000410277 118 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 CCDC58P2-201ENST00000417131 366 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 MTND2P9-201ENST00000422293 931 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AL355994.1-201ENST00000424379 260 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC079780.1-201ENST00000428259 207 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC108059.3-201ENST00000456388 214 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 SNORA48.9-201ENST00000516419 162 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AP005902.1-201ENST00000521358 186 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC097655.1-201ENST00000635075 318 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AL390862.1-201ENST00000635467 1469 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 MTND4P27-201ENST00000450813 1354 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 ZNF355P-201ENST00000427301 3216 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 RNU6-839P-201ENST00000363347 108 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 RNU4-27P-201ENST00000410889 139 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 RPL7P34-201ENST00000433316 712 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC087884.1-201ENST00000469738 328 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms