Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
GPC3P51654 AP003467.2-201ENST00000520175 319 ntBASIC2.58□□□□□ -2
GPC3P51654 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.58□□□□□ -2
GPC3P51654 MTCYBP22-201ENST00000603788 447 ntBASIC2.58□□□□□ -2
GPC3P51654 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.58□□□□□ -2
GPC3P51654 AC122133.1-201ENST00000613964 233 ntBASIC2.58□□□□□ -2
GPC3P51654 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.58□□□□□ -2
GPC3P51654 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
GPC3P51654 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
GPC3P51654 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.57□□□□□ -2
GPC3P51654 RNU6-660P-201ENST00000364566 109 ntBASIC2.57□□□□□ -2
GPC3P51654 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
GPC3P51654 USP9YP6-201ENST00000413550 854 ntBASIC2.57□□□□□ -2
GPC3P51654 PTGES3P4-201ENST00000426243 356 ntBASIC2.57□□□□□ -2
GPC3P51654 AL356320.1-201ENST00000429616 163 ntBASIC2.57□□□□□ -2
GPC3P51654 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.57□□□□□ -2
GPC3P51654 LARP1BP3-201ENST00000437229 869 ntBASIC2.57□□□□□ -2
GPC3P51654 AC080013.2-201ENST00000460866 323 ntBASIC2.57□□□□□ -2
GPC3P51654 MTCO2P6-201ENST00000463134 685 ntBASIC2.57□□□□□ -2
GPC3P51654 BZW1P2-201ENST00000473537 826 ntBASIC2.57□□□□□ -2
GPC3P51654 MTCYBP35-201ENST00000503630 1137 ntBASIC2.57□□□□□ -2
GPC3P51654 AC005178.1-201ENST00000508392 440 ntBASIC2.57□□□□□ -2
GPC3P51654 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.57□□□□□ -2
GPC3P51654 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.57□□□□□ -2
GPC3P51654 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.57□□□□□ -2
GPC3P51654 RNA5SP112-201ENST00000515937 99 ntBASIC2.57□□□□□ -2
GPC3P51654 SNORA31.3-201ENST00000516029 96 ntBASIC2.57□□□□□ -2
GPC3P51654 RNU6-232P-201ENST00000517144 64 ntBASIC2.57□□□□□ -2
GPC3P51654 RNA5SP402-201ENST00000517148 110 ntBASIC2.57□□□□□ -2
GPC3P51654 IGLV3-17-201ENST00000519099 244 ntBASIC2.57□□□□□ -2
GPC3P51654 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.57□□□□□ -2
GPC3P51654 AC121758.2-201ENST00000553271 193 ntBASIC2.57□□□□□ -2
GPC3P51654 AL121821.2-201ENST00000556081 394 ntBASIC2.57□□□□□ -2
GPC3P51654 MIR5007-201ENST00000583098 95 ntBASIC2.57□□□□□ -2
GPC3P51654 MIR4293-201ENST00000584305 78 ntBASIC2.57□□□□□ -2
GPC3P51654 AL645944.1-201ENST00000603857 493 ntBASIC2.57□□□□□ -2
GPC3P51654 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.57□□□□□ -2
GPC3P51654 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.57□□□□□ -2
GPC3P51654 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
GPC3P51654 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
GPC3P51654 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
GPC3P51654 MTND5P6-201ENST00000422338 1798 ntBASIC2.56□□□□□ -2
GPC3P51654 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.56□□□□□ -2
GPC3P51654 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.56□□□□□ -2
GPC3P51654 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.56□□□□□ -2
GPC3P51654 NACAP2-201ENST00000318548 624 ntBASIC2.56□□□□□ -2
GPC3P51654 RNU6-486P-201ENST00000363116 107 ntBASIC2.56□□□□□ -2
GPC3P51654 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.56□□□□□ -2
GPC3P51654 RNA5SP181-201ENST00000410246 98 ntBASIC2.56□□□□□ -2
GPC3P51654 RNU4-72P-201ENST00000410754 173 ntBASIC2.56□□□□□ -2
GPC3P51654 NPM1P11-201ENST00000417106 855 ntBASIC2.56□□□□□ -2
GPC3P51654 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.56□□□□□ -2
GPC3P51654 AC006366.1-201ENST00000422002 759 ntBASIC2.56□□□□□ -2
GPC3P51654 AC011233.1-201ENST00000422812 283 ntBASIC2.56□□□□□ -2
GPC3P51654 BX276092.3-201ENST00000424182 230 ntBASIC2.56□□□□□ -2
GPC3P51654 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.56□□□□□ -2
GPC3P51654 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.56□□□□□ -2
GPC3P51654 AL139415.2-201ENST00000431968 163 ntBASIC2.56□□□□□ -2
GPC3P51654 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.56□□□□□ -2
GPC3P51654 AL513124.1-201ENST00000450410 614 ntBASIC2.56□□□□□ -2
GPC3P51654 AC011753.1-201ENST00000451001 220 ntBASIC2.56□□□□□ -2
GPC3P51654 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.56□□□□□ -2
GPC3P51654 AL139824.2-201ENST00000458731 1095 ntBASIC2.56□□□□□ -2
GPC3P51654 RPL23AP49-201ENST00000492925 468 ntBASIC2.56□□□□□ -2
GPC3P51654 RPS29P21-201ENST00000496272 170 ntBASIC2.56□□□□□ -2
GPC3P51654 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.56□□□□□ -2
GPC3P51654 MIR892C-201ENST00000516410 77 ntBASIC2.56□□□□□ -2
GPC3P51654 RNU6-703P-201ENST00000516946 107 ntBASIC2.56□□□□□ -2
GPC3P51654 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.56□□□□□ -2
GPC3P51654 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.56□□□□□ -2
GPC3P51654 DUXAP5-201ENST00000529668 529 ntBASIC2.56□□□□□ -2
GPC3P51654 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.56□□□□□ -2
GPC3P51654 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.56□□□□□ -2
GPC3P51654 AC005261.5-201ENST00000596280 355 ntBASIC2.56□□□□□ -2
GPC3P51654 AC008121.1-201ENST00000603244 268 ntBASIC2.56□□□□□ -2
GPC3P51654 FRG1KP-201ENST00000623592 341 ntBASIC2.56□□□□□ -2
GPC3P51654 AL359854.1-201ENST00000614203 1594 ntBASIC2.56□□□□□ -2
GPC3P51654 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
GPC3P51654 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
GPC3P51654 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.56□□□□□ -2
GPC3P51654 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.56□□□□□ -2
GPC3P51654 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
GPC3P51654 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.55□□□□□ -2
GPC3P51654 AL139397.2-201ENST00000404529 772 ntBASIC2.55□□□□□ -2
GPC3P51654 RNU2-62P-201ENST00000410868 191 ntBASIC2.55□□□□□ -2
GPC3P51654 ELOCP17-201ENST00000414751 326 ntBASIC2.55□□□□□ -2
GPC3P51654 CYCSP48-201ENST00000417124 323 ntBASIC2.55□□□□□ -2
GPC3P51654 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.55□□□□□ -2
GPC3P51654 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.55□□□□□ -2
GPC3P51654 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.55□□□□□ -2
GPC3P51654 AL121890.1-201ENST00000435457 205 ntBASIC2.55□□□□□ -2
GPC3P51654 AC018634.1-201ENST00000437554 401 ntBASIC2.55□□□□□ -2
GPC3P51654 AL512286.1-201ENST00000439244 400 ntBASIC2.55□□□□□ -2
GPC3P51654 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.55□□□□□ -2
GPC3P51654 NEFMP1-201ENST00000443423 1006 ntBASIC2.55□□□□□ -2
GPC3P51654 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.55□□□□□ -2
GPC3P51654 AL133217.1-201ENST00000450980 425 ntBASIC2.55□□□□□ -2
GPC3P51654 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.55□□□□□ -2
GPC3P51654 RNU6-953P-201ENST00000459154 107 ntBASIC2.55□□□□□ -2
GPC3P51654 MRPL42P6-201ENST00000486397 371 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms