Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHRNA4P43681 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CHRNA4P43681 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.66□□□□□ -1.66
CHRNA4P43681 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CHRNA4P43681 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHRNA4P43681 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CHRNA4P43681 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
CHRNA4P43681 AC110491.1-201ENST00000562191 2010 ntBASIC4.65□□□□□ -1.66
CHRNA4P43681 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
CHRNA4P43681 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
CHRNA4P43681 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CHRNA4P43681 RNU6-827P-201ENST00000365553 106 ntBASIC4.65□□□□□ -1.67
CHRNA4P43681 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
CHRNA4P43681 SNORA56-201ENST00000383966 129 ntBASIC4.65□□□□□ -1.67
CHRNA4P43681 Y_RNA.420-201ENST00000384043 110 ntBASIC4.65□□□□□ -1.67
CHRNA4P43681 RNU6-211P-201ENST00000384047 107 ntBASIC4.65□□□□□ -1.67
CHRNA4P43681 Y_RNA.534-201ENST00000384599 112 ntBASIC4.65□□□□□ -1.67
CHRNA4P43681 RNU6-178P-201ENST00000384631 104 ntBASIC4.65□□□□□ -1.67
CHRNA4P43681 RPL7AP73-201ENST00000413490 353 ntBASIC4.65□□□□□ -1.67
CHRNA4P43681 POLR2KP2-201ENST00000438155 177 ntBASIC4.65□□□□□ -1.67
CHRNA4P43681 FHP1-201ENST00000442741 703 ntBASIC4.65□□□□□ -1.67
CHRNA4P43681 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.65□□□□□ -1.67
CHRNA4P43681 RANP8-201ENST00000444720 713 ntBASIC4.65□□□□□ -1.67
CHRNA4P43681 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.65□□□□□ -1.67
CHRNA4P43681 RPS29P27-201ENST00000463711 170 ntBASIC4.65□□□□□ -1.67
CHRNA4P43681 TOMM22P6-201ENST00000465035 409 ntBASIC4.65□□□□□ -1.67
CHRNA4P43681 RPS29P22-201ENST00000472363 168 ntBASIC4.65□□□□□ -1.67
CHRNA4P43681 RN7SKP46-201ENST00000515942 234 ntBASIC4.65□□□□□ -1.67
CHRNA4P43681 MIR892C-201ENST00000516410 77 ntBASIC4.65□□□□□ -1.67
CHRNA4P43681 DEFB131C-201ENST00000528817 165 ntBASIC4.65□□□□□ -1.67
CHRNA4P43681 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.65□□□□□ -1.67
CHRNA4P43681 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC4.65□□□□□ -1.67
CHRNA4P43681 RPL23AP88-201ENST00000605759 454 ntBASIC4.65□□□□□ -1.67
CHRNA4P43681 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.65□□□□□ -1.67
CHRNA4P43681 U3.53-201ENST00000628922 216 ntBASIC4.65□□□□□ -1.67
CHRNA4P43681 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CHRNA4P43681 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CHRNA4P43681 AC026951.1-201ENST00000559530 2459 ntBASIC4.65□□□□□ -1.67
CHRNA4P43681 MTND5P32-201ENST00000560711 1802 ntBASIC4.65□□□□□ -1.67
CHRNA4P43681 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CHRNA4P43681 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.64□□□□□ -1.67
CHRNA4P43681 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CHRNA4P43681 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
CHRNA4P43681 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CHRNA4P43681 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
CHRNA4P43681 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
CHRNA4P43681 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CHRNA4P43681 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CHRNA4P43681 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
CHRNA4P43681 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CHRNA4P43681 AC021146.4-201ENST00000309229 279 ntBASIC4.64□□□□□ -1.67
CHRNA4P43681 RNU6-222P-201ENST00000362438 107 ntBASIC4.64□□□□□ -1.67
CHRNA4P43681 RNA5SP391-201ENST00000363456 119 ntBASIC4.64□□□□□ -1.67
CHRNA4P43681 RNU6-275P-201ENST00000364910 107 ntBASIC4.64□□□□□ -1.67
CHRNA4P43681 RNU6-1179P-201ENST00000384667 107 ntBASIC4.64□□□□□ -1.67
CHRNA4P43681 MIR92A2-201ENST00000385299 75 ntBASIC4.64□□□□□ -1.67
CHRNA4P43681 RPS4XP3-201ENST00000398541 413 ntBASIC4.64□□□□□ -1.67
CHRNA4P43681 AC099677.1-201ENST00000420575 175 ntBASIC4.64□□□□□ -1.67
CHRNA4P43681 Z82188.1-201ENST00000436709 154 ntBASIC4.64□□□□□ -1.67
CHRNA4P43681 AC009237.7-201ENST00000447357 229 ntBASIC4.64□□□□□ -1.67
CHRNA4P43681 AL354710.1-201ENST00000453641 246 ntBASIC4.64□□□□□ -1.67
CHRNA4P43681 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.64□□□□□ -1.67
CHRNA4P43681 SCARNA10-201ENST00000459255 330 ntBASIC4.64□□□□□ -1.67
CHRNA4P43681 AC117440.1-201ENST00000474107 571 ntBASIC4.64□□□□□ -1.67
CHRNA4P43681 RPL26P26-201ENST00000480251 434 ntBASIC4.64□□□□□ -1.67
CHRNA4P43681 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
CHRNA4P43681 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.64□□□□□ -1.67
CHRNA4P43681 CR383656.7-201ENST00000548164 174 ntBASIC4.64□□□□□ -1.67
CHRNA4P43681 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.64□□□□□ -1.67
CHRNA4P43681 MIR6130-201ENST00000619419 109 ntBASIC4.64□□□□□ -1.67
CHRNA4P43681 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CHRNA4P43681 AC005086.4-201ENST00000623065 213 ntBASIC4.64□□□□□ -1.67
CHRNA4P43681 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CHRNA4P43681 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CHRNA4P43681 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CHRNA4P43681 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CHRNA4P43681 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CHRNA4P43681 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CHRNA4P43681 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.63□□□□□ -1.67
CHRNA4P43681 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.63□□□□□ -1.67
CHRNA4P43681 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CHRNA4P43681 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
CHRNA4P43681 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CHRNA4P43681 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHRNA4P43681 RNU6-899P-201ENST00000363947 107 ntBASIC4.63□□□□□ -1.67
CHRNA4P43681 RNU4-17P-201ENST00000365598 141 ntBASIC4.63□□□□□ -1.67
CHRNA4P43681 SNORA22-201ENST00000383907 134 ntBASIC4.63□□□□□ -1.67
CHRNA4P43681 MIR659-201ENST00000384963 97 ntBASIC4.63□□□□□ -1.67
CHRNA4P43681 SNORD56-201ENST00000413522 71 ntBASIC4.63□□□□□ -1.67
CHRNA4P43681 AL117339.3-201ENST00000418733 162 ntBASIC4.63□□□□□ -1.67
CHRNA4P43681 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.63□□□□□ -1.67
CHRNA4P43681 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.63□□□□□ -1.67
CHRNA4P43681 AC016700.2-201ENST00000446011 156 ntBASIC4.63□□□□□ -1.67
CHRNA4P43681 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CHRNA4P43681 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.63□□□□□ -1.67
CHRNA4P43681 RN7SL354P-201ENST00000469282 294 ntBASIC4.63□□□□□ -1.67
CHRNA4P43681 AC006463.2-201ENST00000473326 348 ntBASIC4.63□□□□□ -1.67
CHRNA4P43681 SNORA40.9-201ENST00000515895 93 ntBASIC4.63□□□□□ -1.67
CHRNA4P43681 RN7SKP179-201ENST00000516126 217 ntBASIC4.63□□□□□ -1.67
CHRNA4P43681 AC103783.1-201ENST00000520506 373 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms