Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SCNN1AP37088 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.82□□□□□ -1.64
SCNN1AP37088 AL672296.1-201ENST00000427780 2158 ntBASIC4.82□□□□□ -1.64
SCNN1AP37088 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SCNN1AP37088 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SCNN1AP37088 RNU6-600P-201ENST00000362524 99 ntBASIC4.82□□□□□ -1.64
SCNN1AP37088 SNORD115-32-201ENST00000364079 82 ntBASIC4.82□□□□□ -1.64
SCNN1AP37088 RNU1-73P-201ENST00000383971 164 ntBASIC4.82□□□□□ -1.64
SCNN1AP37088 RNY3P4-201ENST00000384428 101 ntBASIC4.82□□□□□ -1.64
SCNN1AP37088 MIR518D-201ENST00000385014 87 ntBASIC4.82□□□□□ -1.64
SCNN1AP37088 MIR493-201ENST00000385254 89 ntBASIC4.82□□□□□ -1.64
SCNN1AP37088 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.82□□□□□ -1.64
SCNN1AP37088 SNORD115-46-201ENST00000390982 71 ntBASIC4.82□□□□□ -1.64
SCNN1AP37088 RNA5SP129-201ENST00000410276 118 ntBASIC4.82□□□□□ -1.64
SCNN1AP37088 RNU6-1245P-201ENST00000411130 106 ntBASIC4.82□□□□□ -1.64
SCNN1AP37088 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.82□□□□□ -1.64
SCNN1AP37088 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.82□□□□□ -1.64
SCNN1AP37088 AL392103.1-201ENST00000447000 198 ntBASIC4.82□□□□□ -1.64
SCNN1AP37088 HMGB3P8-201ENST00000449709 577 ntBASIC4.82□□□□□ -1.64
SCNN1AP37088 RN7SL860P-201ENST00000473738 223 ntBASIC4.82□□□□□ -1.64
SCNN1AP37088 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.82□□□□□ -1.64
SCNN1AP37088 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.82□□□□□ -1.64
SCNN1AP37088 RNA5SP446-201ENST00000515955 82 ntBASIC4.82□□□□□ -1.64
SCNN1AP37088 SNORA31.6-201ENST00000516241 130 ntBASIC4.82□□□□□ -1.64
SCNN1AP37088 AC060766.3-201ENST00000591442 263 ntBASIC4.82□□□□□ -1.64
SCNN1AP37088 MIR6134-201ENST00000617606 109 ntBASIC4.82□□□□□ -1.64
SCNN1AP37088 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SCNN1AP37088 AC140113.4-201ENST00000622087 222 ntBASIC4.82□□□□□ -1.64
SCNN1AP37088 AC091903.1-201ENST00000624322 454 ntBASIC4.82□□□□□ -1.64
SCNN1AP37088 SCARNA4-201ENST00000629045 128 ntBASIC4.82□□□□□ -1.64
SCNN1AP37088 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SCNN1AP37088 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.82□□□□□ -1.64
SCNN1AP37088 OR14L1P-202ENST00000641545 3009 ntBASIC4.82□□□□□ -1.64
SCNN1AP37088 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SCNN1AP37088 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SCNN1AP37088 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCNN1AP37088 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCNN1AP37088 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCNN1AP37088 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCNN1AP37088 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
SCNN1AP37088 Y_RNA.352-201ENST00000365439 102 ntBASIC4.81□□□□□ -1.64
SCNN1AP37088 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCNN1AP37088 RPL21P17-201ENST00000397467 475 ntBASIC4.81□□□□□ -1.64
SCNN1AP37088 AL603910.2-201ENST00000407268 136 ntBASIC4.81□□□□□ -1.64
SCNN1AP37088 HSPE1P12-201ENST00000412576 301 ntBASIC4.81□□□□□ -1.64
SCNN1AP37088 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.81□□□□□ -1.64
SCNN1AP37088 AL591043.1-201ENST00000432461 424 ntBASIC4.81□□□□□ -1.64
SCNN1AP37088 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.81□□□□□ -1.64
SCNN1AP37088 AL162591.2-201ENST00000449634 317 ntBASIC4.81□□□□□ -1.64
SCNN1AP37088 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.81□□□□□ -1.64
SCNN1AP37088 RNU1-103P-201ENST00000516502 125 ntBASIC4.81□□□□□ -1.64
SCNN1AP37088 DEFB108E-201ENST00000524692 240 ntBASIC4.81□□□□□ -1.64
SCNN1AP37088 CR383656.8-201ENST00000549046 145 ntBASIC4.81□□□□□ -1.64
SCNN1AP37088 AC136932.1-201ENST00000574771 208 ntBASIC4.81□□□□□ -1.64
SCNN1AP37088 AC091178.1-203ENST00000584586 279 ntBASIC4.81□□□□□ -1.64
SCNN1AP37088 AL023881.1-201ENST00000621088 301 ntBASIC4.81□□□□□ -1.64
SCNN1AP37088 AF117829.1-206ENST00000621883 3802 ntBASIC4.81□□□□□ -1.64
SCNN1AP37088 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.81□□□□□ -1.64
SCNN1AP37088 AL450472.1-202ENST00000637286 180 ntBASIC4.81□□□□□ -1.64
SCNN1AP37088 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.81□□□□□ -1.64
SCNN1AP37088 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCNN1AP37088 AC018529.3-201ENST00000624212 2254 ntBASIC4.81□□□□□ -1.64
SCNN1AP37088 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SCNN1AP37088 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.81□□□□□ -1.64
SCNN1AP37088 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SCNN1AP37088 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SCNN1AP37088 AC002546.1-201ENST00000588041 2504 ntBASIC4.8□□□□□ -1.64
SCNN1AP37088 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCNN1AP37088 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.8□□□□□ -1.64
SCNN1AP37088 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SCNN1AP37088 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SCNN1AP37088 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.8□□□□□ -1.64
SCNN1AP37088 AC021146.4-201ENST00000309229 279 ntBASIC4.8□□□□□ -1.64
SCNN1AP37088 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SCNN1AP37088 Y_RNA.123-201ENST00000363338 102 ntBASIC4.8□□□□□ -1.64
SCNN1AP37088 SNORD113.2-201ENST00000364166 89 ntBASIC4.8□□□□□ -1.64
SCNN1AP37088 Y_RNA.297-201ENST00000364950 91 ntBASIC4.8□□□□□ -1.64
SCNN1AP37088 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SCNN1AP37088 AL590139.1-201ENST00000416267 400 ntBASIC4.8□□□□□ -1.64
SCNN1AP37088 TMEM167AP1-201ENST00000423409 219 ntBASIC4.8□□□□□ -1.64
SCNN1AP37088 MTCO3P29-201ENST00000432119 779 ntBASIC4.8□□□□□ -1.64
SCNN1AP37088 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.8□□□□□ -1.64
SCNN1AP37088 AC087190.1-201ENST00000484462 480 ntBASIC4.8□□□□□ -1.64
SCNN1AP37088 AC107032.1-201ENST00000485945 480 ntBASIC4.8□□□□□ -1.64
SCNN1AP37088 RPS23P5-201ENST00000495419 428 ntBASIC4.8□□□□□ -1.64
SCNN1AP37088 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.8□□□□□ -1.64
SCNN1AP37088 ANXA2P1-201ENST00000505539 926 ntBASIC4.8□□□□□ -1.64
SCNN1AP37088 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.8□□□□□ -1.64
SCNN1AP37088 AC107016.1-201ENST00000550463 337 ntBASIC4.8□□□□□ -1.64
SCNN1AP37088 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.8□□□□□ -1.64
SCNN1AP37088 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.8□□□□□ -1.64
SCNN1AP37088 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.8□□□□□ -1.64
SCNN1AP37088 RMST_6.1-201ENST00000611980 203 ntBASIC4.8□□□□□ -1.64
SCNN1AP37088 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.8□□□□□ -1.64
SCNN1AP37088 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCNN1AP37088 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCNN1AP37088 HAUS6P2-201ENST00000433254 2404 ntBASIC4.8□□□□□ -1.64
SCNN1AP37088 CPHL1P-201ENST00000461341 3407 ntBASIC4.79□□□□□ -1.64
SCNN1AP37088 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
SCNN1AP37088 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms