Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 PPIAP15-201ENST00000479662 484 ntBASIC4.79□□□□□ -1.64
ERCC3P19447 RPS29P20-201ENST00000489592 171 ntBASIC4.79□□□□□ -1.64
ERCC3P19447 AC097473.1-201ENST00000508142 408 ntBASIC4.79□□□□□ -1.64
ERCC3P19447 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.79□□□□□ -1.64
ERCC3P19447 AC113155.1-201ENST00000511141 769 ntBASIC4.79□□□□□ -1.64
ERCC3P19447 RNA5SP143-201ENST00000516936 115 ntBASIC4.79□□□□□ -1.64
ERCC3P19447 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.79□□□□□ -1.64
ERCC3P19447 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.79□□□□□ -1.64
ERCC3P19447 AC100770.1-201ENST00000532310 322 ntBASIC4.79□□□□□ -1.64
ERCC3P19447 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.79□□□□□ -1.64
ERCC3P19447 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.79□□□□□ -1.64
ERCC3P19447 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.79□□□□□ -1.64
ERCC3P19447 AC110741.2-201ENST00000605278 268 ntBASIC4.79□□□□□ -1.64
ERCC3P19447 AC027290.2-201ENST00000623210 18662 ntBASIC4.79□□□□□ -1.64
ERCC3P19447 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ERCC3P19447 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
ERCC3P19447 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
ERCC3P19447 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.78□□□□□ -1.64
ERCC3P19447 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.78□□□□□ -1.64
ERCC3P19447 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
ERCC3P19447 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
ERCC3P19447 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ERCC3P19447 RNA5SP22-201ENST00000365393 109 ntBASIC4.78□□□□□ -1.64
ERCC3P19447 Y_RNA.404-201ENST00000383978 102 ntBASIC4.78□□□□□ -1.64
ERCC3P19447 RNU6-331P-201ENST00000384724 107 ntBASIC4.78□□□□□ -1.64
ERCC3P19447 MIR559-201ENST00000385188 96 ntBASIC4.78□□□□□ -1.64
ERCC3P19447 RNU6-328P-201ENST00000390887 106 ntBASIC4.78□□□□□ -1.64
ERCC3P19447 PTMAP2-201ENST00000397627 327 ntBASIC4.78□□□□□ -1.64
ERCC3P19447 MIR888-201ENST00000401186 77 ntBASIC4.78□□□□□ -1.64
ERCC3P19447 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.78□□□□□ -1.64
ERCC3P19447 ATG3P1-201ENST00000419507 911 ntBASIC4.78□□□□□ -1.64
ERCC3P19447 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.78□□□□□ -1.64
ERCC3P19447 AL590664.1-201ENST00000448065 339 ntBASIC4.78□□□□□ -1.64
ERCC3P19447 HMGB3P22-202ENST00000451823 572 ntBASIC4.78□□□□□ -1.64
ERCC3P19447 Y_RNA.631-201ENST00000459607 101 ntBASIC4.78□□□□□ -1.64
ERCC3P19447 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ERCC3P19447 TRAV32-201ENST00000553993 340 ntBASIC4.78□□□□□ -1.64
ERCC3P19447 AC109446.1-201ENST00000566172 220 ntBASIC4.78□□□□□ -1.64
ERCC3P19447 MIR3171-201ENST00000584270 74 ntBASIC4.78□□□□□ -1.64
ERCC3P19447 AC020895.1-201ENST00000595362 272 ntBASIC4.78□□□□□ -1.64
ERCC3P19447 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.78□□□□□ -1.64
ERCC3P19447 AC009314.1-201ENST00000603871 304 ntBASIC4.78□□□□□ -1.64
ERCC3P19447 CYP2C61P-201ENST00000604072 290 ntBASIC4.78□□□□□ -1.64
ERCC3P19447 AP000787.2-201ENST00000604432 568 ntBASIC4.78□□□□□ -1.64
ERCC3P19447 MIR3976-201ENST00000606807 139 ntBASIC4.78□□□□□ -1.64
ERCC3P19447 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.78□□□□□ -1.64
ERCC3P19447 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.78□□□□□ -1.64
ERCC3P19447 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.78□□□□□ -1.64
ERCC3P19447 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.78□□□□□ -1.64
ERCC3P19447 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ERCC3P19447 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
ERCC3P19447 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
ERCC3P19447 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
ERCC3P19447 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.65
ERCC3P19447 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.65
ERCC3P19447 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.77□□□□□ -1.65
ERCC3P19447 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
ERCC3P19447 RNU6-1317P-201ENST00000364582 104 ntBASIC4.77□□□□□ -1.65
ERCC3P19447 RNU6-890P-201ENST00000384121 107 ntBASIC4.77□□□□□ -1.65
ERCC3P19447 MIR521-1-201ENST00000384902 87 ntBASIC4.77□□□□□ -1.65
ERCC3P19447 RPL21P17-201ENST00000397467 475 ntBASIC4.77□□□□□ -1.65
ERCC3P19447 RNU4-6P-201ENST00000410804 122 ntBASIC4.77□□□□□ -1.65
ERCC3P19447 FTH1P25-201ENST00000447665 469 ntBASIC4.77□□□□□ -1.65
ERCC3P19447 MTATP6P7-201ENST00000453315 681 ntBASIC4.77□□□□□ -1.65
ERCC3P19447 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.77□□□□□ -1.65
ERCC3P19447 RNU7-152P-201ENST00000458982 64 ntBASIC4.77□□□□□ -1.65
ERCC3P19447 ACA59.1-201ENST00000515966 143 ntBASIC4.77□□□□□ -1.65
ERCC3P19447 RNU6-703P-201ENST00000516946 107 ntBASIC4.77□□□□□ -1.65
ERCC3P19447 AC109479.2-201ENST00000517842 174 ntBASIC4.77□□□□□ -1.65
ERCC3P19447 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.77□□□□□ -1.65
ERCC3P19447 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.77□□□□□ -1.65
ERCC3P19447 CYCSP39-201ENST00000565821 309 ntBASIC4.77□□□□□ -1.65
ERCC3P19447 MIR4273-201ENST00000582824 84 ntBASIC4.77□□□□□ -1.65
ERCC3P19447 AC011890.2-201ENST00000613393 294 ntBASIC4.77□□□□□ -1.65
ERCC3P19447 AC004852.3-201ENST00000614131 326 ntBASIC4.77□□□□□ -1.65
ERCC3P19447 AC068831.7-201ENST00000616954 363 ntBASIC4.77□□□□□ -1.65
ERCC3P19447 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ERCC3P19447 MIR6500-201ENST00000622700 86 ntBASIC4.77□□□□□ -1.65
ERCC3P19447 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
ERCC3P19447 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
ERCC3P19447 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ERCC3P19447 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ERCC3P19447 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ERCC3P19447 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ERCC3P19447 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ERCC3P19447 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.76□□□□□ -1.65
ERCC3P19447 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.76□□□□□ -1.65
ERCC3P19447 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ERCC3P19447 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
ERCC3P19447 RNU6-428P-201ENST00000362942 107 ntBASIC4.76□□□□□ -1.65
ERCC3P19447 RNU6-778P-201ENST00000363269 103 ntBASIC4.76□□□□□ -1.65
ERCC3P19447 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
ERCC3P19447 RNU6-474P-201ENST00000384243 107 ntBASIC4.76□□□□□ -1.65
ERCC3P19447 RNU6-72P-201ENST00000384285 79 ntBASIC4.76□□□□□ -1.65
ERCC3P19447 RNU6ATAC-201ENST00000408749 126 ntBASIC4.76□□□□□ -1.65
ERCC3P19447 SYF2P2-201ENST00000417620 583 ntBASIC4.76□□□□□ -1.65
ERCC3P19447 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.76□□□□□ -1.65
ERCC3P19447 RPL23AP82-202ENST00000427528 469 ntBASIC4.76□□□□□ -1.65
ERCC3P19447 AC017083.1-201ENST00000428093 483 ntBASIC4.76□□□□□ -1.65
ERCC3P19447 AL445584.1-201ENST00000431451 330 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms