Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 UBE2L2-201ENST00000254302 429 ntBASIC3.14□□□□□ -1.91
ATP2A1O14983 RNU6-179P-201ENST00000363350 107 ntBASIC3.14□□□□□ -1.91
ATP2A1O14983 RNU6-190P-201ENST00000384154 102 ntBASIC3.14□□□□□ -1.91
ATP2A1O14983 RNU6-1215P-201ENST00000384441 102 ntBASIC3.14□□□□□ -1.91
ATP2A1O14983 MIR196B-201ENST00000384852 84 ntBASIC3.14□□□□□ -1.91
ATP2A1O14983 RNU6-192P-201ENST00000391253 100 ntBASIC3.14□□□□□ -1.91
ATP2A1O14983 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.14□□□□□ -1.91
ATP2A1O14983 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.14□□□□□ -1.91
ATP2A1O14983 ARL5AP4-201ENST00000430731 512 ntBASIC3.14□□□□□ -1.91
ATP2A1O14983 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.14□□□□□ -1.91
ATP2A1O14983 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ATP2A1O14983 AC108078.2-201ENST00000510750 236 ntBASIC3.14□□□□□ -1.91
ATP2A1O14983 AC114781.4-201ENST00000513707 639 ntBASIC3.14□□□□□ -1.91
ATP2A1O14983 RNA5SP471-201ENST00000516971 106 ntBASIC3.14□□□□□ -1.91
ATP2A1O14983 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.14□□□□□ -1.91
ATP2A1O14983 OR4R1P-201ENST00000529879 463 ntBASIC3.14□□□□□ -1.91
ATP2A1O14983 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
ATP2A1O14983 OR5B19P-201ENST00000531766 928 ntBASIC3.14□□□□□ -1.91
ATP2A1O14983 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.14□□□□□ -1.91
ATP2A1O14983 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.14□□□□□ -1.91
ATP2A1O14983 MIR4506-201ENST00000584693 77 ntBASIC3.14□□□□□ -1.91
ATP2A1O14983 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.14□□□□□ -1.91
ATP2A1O14983 AC098826.3-201ENST00000603823 466 ntBASIC3.14□□□□□ -1.91
ATP2A1O14983 AL161798.1-201ENST00000604630 131 ntBASIC3.14□□□□□ -1.91
ATP2A1O14983 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ATP2A1O14983 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.14□□□□□ -1.91
ATP2A1O14983 AC093648.1-201ENST00000623546 606 ntBASIC3.14□□□□□ -1.91
ATP2A1O14983 AC005609.4-201ENST00000625071 447 ntBASIC3.14□□□□□ -1.91
ATP2A1O14983 MIR6863-201ENST00000636112 90 ntBASIC3.14□□□□□ -1.91
ATP2A1O14983 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
ATP2A1O14983 ASNSP3-201ENST00000451989 1306 ntBASIC3.14□□□□□ -1.91
ATP2A1O14983 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ATP2A1O14983 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ATP2A1O14983 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
ATP2A1O14983 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ATP2A1O14983 Y_RNA.245-201ENST00000364493 95 ntBASIC3.13□□□□□ -1.91
ATP2A1O14983 SNORA24.1-201ENST00000384401 135 ntBASIC3.13□□□□□ -1.91
ATP2A1O14983 RNU6-606P-201ENST00000384721 111 ntBASIC3.13□□□□□ -1.91
ATP2A1O14983 MIR454-201ENST00000390180 115 ntBASIC3.13□□□□□ -1.91
ATP2A1O14983 RNU6-387P-201ENST00000411331 105 ntBASIC3.13□□□□□ -1.91
ATP2A1O14983 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ATP2A1O14983 AC114491.1-201ENST00000416095 246 ntBASIC3.13□□□□□ -1.91
ATP2A1O14983 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.13□□□□□ -1.91
ATP2A1O14983 AL109913.1-201ENST00000421173 514 ntBASIC3.13□□□□□ -1.91
ATP2A1O14983 AC112220.1-201ENST00000434628 355 ntBASIC3.13□□□□□ -1.91
ATP2A1O14983 PSPHP1-201ENST00000450062 261 ntBASIC3.13□□□□□ -1.91
ATP2A1O14983 RPL21P41-201ENST00000459863 264 ntBASIC3.13□□□□□ -1.91
ATP2A1O14983 MRPS17P3-201ENST00000465453 385 ntBASIC3.13□□□□□ -1.91
ATP2A1O14983 AC003982.1-202ENST00000469928 248 ntBASIC3.13□□□□□ -1.91
ATP2A1O14983 AC090525.1-201ENST00000479116 478 ntBASIC3.13□□□□□ -1.91
ATP2A1O14983 RPL9P33-201ENST00000484311 566 ntBASIC3.13□□□□□ -1.91
ATP2A1O14983 RNA5SP385-201ENST00000515947 110 ntBASIC3.13□□□□□ -1.91
ATP2A1O14983 RNU6-506P-201ENST00000516553 94 ntBASIC3.13□□□□□ -1.91
ATP2A1O14983 RNA5SP290-201ENST00000517133 127 ntBASIC3.13□□□□□ -1.91
ATP2A1O14983 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.13□□□□□ -1.91
ATP2A1O14983 AP003034.1-201ENST00000534621 422 ntBASIC3.13□□□□□ -1.91
ATP2A1O14983 DNAJC8P1-201ENST00000554535 372 ntBASIC3.13□□□□□ -1.91
ATP2A1O14983 AMZ2P1-203ENST00000565833 850 ntBASIC3.13□□□□□ -1.91
ATP2A1O14983 MIR3609-201ENST00000582661 80 ntBASIC3.13□□□□□ -1.91
ATP2A1O14983 ZNF861P-201ENST00000588126 639 ntBASIC3.13□□□□□ -1.91
ATP2A1O14983 AC080078.2-201ENST00000603766 501 ntBASIC3.13□□□□□ -1.91
ATP2A1O14983 HSPE1P7-201ENST00000604681 321 ntBASIC3.13□□□□□ -1.91
ATP2A1O14983 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.13□□□□□ -1.91
ATP2A1O14983 AL138880.2-201ENST00000616214 239 ntBASIC3.13□□□□□ -1.91
ATP2A1O14983 AL359880.1-201ENST00000621879 266 ntBASIC3.13□□□□□ -1.91
ATP2A1O14983 AC243829.7-201ENST00000633081 225 ntBASIC3.13□□□□□ -1.91
ATP2A1O14983 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.13□□□□□ -1.91
ATP2A1O14983 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.13□□□□□ -1.91
ATP2A1O14983 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.13□□□□□ -1.91
ATP2A1O14983 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ATP2A1O14983 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ATP2A1O14983 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ATP2A1O14983 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ATP2A1O14983 RNU6-61P-201ENST00000365528 109 ntBASIC3.12□□□□□ -1.91
ATP2A1O14983 RNU4-48P-201ENST00000365559 182 ntBASIC3.12□□□□□ -1.91
ATP2A1O14983 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
ATP2A1O14983 Y_RNA.516-201ENST00000384541 124 ntBASIC3.12□□□□□ -1.91
ATP2A1O14983 MTCO3P40-201ENST00000392516 676 ntBASIC3.12□□□□□ -1.91
ATP2A1O14983 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.12□□□□□ -1.91
ATP2A1O14983 RPS12P24-201ENST00000412619 387 ntBASIC3.12□□□□□ -1.91
ATP2A1O14983 TIMM9P3-201ENST00000428659 274 ntBASIC3.12□□□□□ -1.91
ATP2A1O14983 AL591212.2-201ENST00000433923 257 ntBASIC3.12□□□□□ -1.91
ATP2A1O14983 RPS15AP9-201ENST00000439856 381 ntBASIC3.12□□□□□ -1.91
ATP2A1O14983 MTND4P25-201ENST00000441039 533 ntBASIC3.12□□□□□ -1.91
ATP2A1O14983 AC093899.1-201ENST00000457984 376 ntBASIC3.12□□□□□ -1.91
ATP2A1O14983 AP004217.1-201ENST00000480579 346 ntBASIC3.12□□□□□ -1.91
ATP2A1O14983 RPL39P36-201ENST00000490784 156 ntBASIC3.12□□□□□ -1.91
ATP2A1O14983 AC096725.1-201ENST00000514266 313 ntBASIC3.12□□□□□ -1.91
ATP2A1O14983 RNA5SP282-201ENST00000516355 108 ntBASIC3.12□□□□□ -1.91
ATP2A1O14983 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.12□□□□□ -1.91
ATP2A1O14983 AP001893.2-201ENST00000526949 202 ntBASIC3.12□□□□□ -1.91
ATP2A1O14983 OR5BN1P-201ENST00000532955 829 ntBASIC3.12□□□□□ -1.91
ATP2A1O14983 AC016957.1-201ENST00000534895 309 ntBASIC3.12□□□□□ -1.91
ATP2A1O14983 AC025449.1-201ENST00000603896 529 ntBASIC3.12□□□□□ -1.91
ATP2A1O14983 AC136601.2-201ENST00000604356 474 ntBASIC3.12□□□□□ -1.91
ATP2A1O14983 AC017083.3-201ENST00000609955 700 ntBASIC3.12□□□□□ -1.91
ATP2A1O14983 AP001486.3-201ENST00000615334 372 ntBASIC3.12□□□□□ -1.91
ATP2A1O14983 AC025034.2-201ENST00000623264 286 ntBASIC3.12□□□□□ -1.91
ATP2A1O14983 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.12□□□□□ -1.91
ATP2A1O14983 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms