Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
RCL1Q9Y2P8 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC15.57■□□□□ 0.08
RCL1Q9Y2P8 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RCL1Q9Y2P8 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.57■□□□□ 0.08
RCL1Q9Y2P8 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RCL1Q9Y2P8 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RCL1Q9Y2P8 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RCL1Q9Y2P8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RCL1Q9Y2P8 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RCL1Q9Y2P8 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RCL1Q9Y2P8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.56■□□□□ 0.08
RCL1Q9Y2P8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.56■□□□□ 0.08
RCL1Q9Y2P8 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RCL1Q9Y2P8 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.56■□□□□ 0.08
RCL1Q9Y2P8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RCL1Q9Y2P8 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RCL1Q9Y2P8 AC139713.2-201ENST00000641328 2723 ntBASIC15.56■□□□□ 0.08
RCL1Q9Y2P8 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.56■□□□□ 0.08
RCL1Q9Y2P8 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RCL1Q9Y2P8 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RCL1Q9Y2P8 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RCL1Q9Y2P8 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RCL1Q9Y2P8 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
RCL1Q9Y2P8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC15.56■□□□□ 0.08
RCL1Q9Y2P8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC15.56■□□□□ 0.08
RCL1Q9Y2P8 RARRES2P4-201ENST00000514074 484 ntBASIC15.56■□□□□ 0.08
RCL1Q9Y2P8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RCL1Q9Y2P8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC15.56■□□□□ 0.08
RCL1Q9Y2P8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC15.56■□□□□ 0.08
RCL1Q9Y2P8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC15.56■□□□□ 0.08
RCL1Q9Y2P8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC15.56■□□□□ 0.08
RCL1Q9Y2P8 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC15.56■□□□□ 0.08
RCL1Q9Y2P8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RCL1Q9Y2P8 MKRN4P-201ENST00000444706 1521 ntBASIC15.56■□□□□ 0.08
RCL1Q9Y2P8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC15.56■□□□□ 0.08
RCL1Q9Y2P8 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RCL1Q9Y2P8 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RCL1Q9Y2P8 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RCL1Q9Y2P8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RCL1Q9Y2P8 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RCL1Q9Y2P8 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RCL1Q9Y2P8 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RCL1Q9Y2P8 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RCL1Q9Y2P8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RCL1Q9Y2P8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RCL1Q9Y2P8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RCL1Q9Y2P8 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
RCL1Q9Y2P8 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RCL1Q9Y2P8 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC15.55■□□□□ 0.08
RCL1Q9Y2P8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
RCL1Q9Y2P8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC15.55■□□□□ 0.08
RCL1Q9Y2P8 AC142381.2-201ENST00000566120 298 ntBASIC15.55■□□□□ 0.08
RCL1Q9Y2P8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC15.55■□□□□ 0.08
RCL1Q9Y2P8 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC15.55■□□□□ 0.08
RCL1Q9Y2P8 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC15.55■□□□□ 0.08
RCL1Q9Y2P8 AC013268.1-206ENST00000638368 961 ntBASIC15.55■□□□□ 0.08
RCL1Q9Y2P8 AC112229.1-201ENST00000639295 961 ntBASIC15.55■□□□□ 0.08
RCL1Q9Y2P8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
RCL1Q9Y2P8 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RCL1Q9Y2P8 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RCL1Q9Y2P8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RCL1Q9Y2P8 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
RCL1Q9Y2P8 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.55■□□□□ 0.08
RCL1Q9Y2P8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RCL1Q9Y2P8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RCL1Q9Y2P8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RCL1Q9Y2P8 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
RCL1Q9Y2P8 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RCL1Q9Y2P8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RCL1Q9Y2P8 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RCL1Q9Y2P8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RCL1Q9Y2P8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.55■□□□□ 0.08
RCL1Q9Y2P8 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 AC104417.2-201ENST00000562989 1793 ntBASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms