Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 HES2-202ENST00000377836 507 ntTSL 2 BASIC28.87■■■□□ 2.21
COL17A1Q9UMD9 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC28.87■■■□□ 2.21
COL17A1Q9UMD9 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
COL17A1Q9UMD9 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC28.87■■■□□ 2.21
COL17A1Q9UMD9 AC005332.3-201ENST00000589904 676 ntBASIC28.87■■■□□ 2.21
COL17A1Q9UMD9 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
COL17A1Q9UMD9 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
COL17A1Q9UMD9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
COL17A1Q9UMD9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC28.86■■■□□ 2.21
COL17A1Q9UMD9 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
COL17A1Q9UMD9 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC28.86■■■□□ 2.21
COL17A1Q9UMD9 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC28.86■■■□□ 2.21
COL17A1Q9UMD9 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC28.86■■■□□ 2.21
COL17A1Q9UMD9 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC28.86■■■□□ 2.21
COL17A1Q9UMD9 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC28.86■■■□□ 2.21
COL17A1Q9UMD9 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC28.86■■■□□ 2.21
COL17A1Q9UMD9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC28.86■■■□□ 2.21
COL17A1Q9UMD9 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC28.86■■■□□ 2.21
COL17A1Q9UMD9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC28.86■■■□□ 2.21
COL17A1Q9UMD9 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
COL17A1Q9UMD9 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
COL17A1Q9UMD9 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC28.85■■■□□ 2.21
COL17A1Q9UMD9 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
COL17A1Q9UMD9 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC28.85■■■□□ 2.21
COL17A1Q9UMD9 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC28.85■■■□□ 2.21
COL17A1Q9UMD9 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC28.85■■■□□ 2.21
COL17A1Q9UMD9 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
COL17A1Q9UMD9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC28.85■■■□□ 2.21
COL17A1Q9UMD9 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
COL17A1Q9UMD9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
COL17A1Q9UMD9 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC28.85■■■□□ 2.21
COL17A1Q9UMD9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
COL17A1Q9UMD9 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
COL17A1Q9UMD9 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
COL17A1Q9UMD9 HNRNPA1P28-201ENST00000424481 961 ntBASIC28.85■■■□□ 2.21
COL17A1Q9UMD9 AF186996.4-201ENST00000467186 377 ntBASIC28.85■■■□□ 2.21
COL17A1Q9UMD9 AL592071.1-201ENST00000611956 408 ntBASIC28.85■■■□□ 2.21
COL17A1Q9UMD9 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
COL17A1Q9UMD9 FEM1AP1-201ENST00000431297 1995 ntBASIC28.84■■■□□ 2.21
COL17A1Q9UMD9 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
COL17A1Q9UMD9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC28.84■■■□□ 2.21
COL17A1Q9UMD9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC28.84■■■□□ 2.21
COL17A1Q9UMD9 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC28.84■■■□□ 2.21
COL17A1Q9UMD9 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
COL17A1Q9UMD9 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
COL17A1Q9UMD9 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC28.84■■■□□ 2.21
COL17A1Q9UMD9 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC28.84■■■□□ 2.21
COL17A1Q9UMD9 AC026310.3-201ENST00000625186 2373 ntBASIC28.84■■■□□ 2.21
COL17A1Q9UMD9 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
COL17A1Q9UMD9 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL17A1Q9UMD9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC28.83■■■□□ 2.21
COL17A1Q9UMD9 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL17A1Q9UMD9 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL17A1Q9UMD9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL17A1Q9UMD9 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC28.83■■■□□ 2.21
COL17A1Q9UMD9 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL17A1Q9UMD9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL17A1Q9UMD9 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC28.83■■■□□ 2.21
COL17A1Q9UMD9 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL17A1Q9UMD9 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL17A1Q9UMD9 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL17A1Q9UMD9 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
COL17A1Q9UMD9 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL17A1Q9UMD9 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC28.83■■■□□ 2.21
COL17A1Q9UMD9 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL17A1Q9UMD9 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL17A1Q9UMD9 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC28.83■■■□□ 2.21
COL17A1Q9UMD9 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL17A1Q9UMD9 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL17A1Q9UMD9 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC28.83■■■□□ 2.21
COL17A1Q9UMD9 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC28.83■■■□□ 2.21
COL17A1Q9UMD9 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
COL17A1Q9UMD9 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
COL17A1Q9UMD9 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
COL17A1Q9UMD9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC28.82■■■□□ 2.2
COL17A1Q9UMD9 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
COL17A1Q9UMD9 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
COL17A1Q9UMD9 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
COL17A1Q9UMD9 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
COL17A1Q9UMD9 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.2
COL17A1Q9UMD9 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC28.82■■■□□ 2.2
COL17A1Q9UMD9 AL023284.2-201ENST00000405850 579 ntBASIC28.82■■■□□ 2.2
COL17A1Q9UMD9 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC28.82■■■□□ 2.2
COL17A1Q9UMD9 FIS1-203ENST00000442303 631 ntTSL 3 BASIC28.82■■■□□ 2.2
COL17A1Q9UMD9 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
COL17A1Q9UMD9 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC28.82■■■□□ 2.2
COL17A1Q9UMD9 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC28.82■■■□□ 2.2
COL17A1Q9UMD9 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
COL17A1Q9UMD9 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC28.81■■■□□ 2.2
COL17A1Q9UMD9 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
COL17A1Q9UMD9 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
COL17A1Q9UMD9 FP700111.2-201ENST00000619190 1892 ntBASIC28.81■■■□□ 2.2
COL17A1Q9UMD9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
COL17A1Q9UMD9 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC28.81■■■□□ 2.2
COL17A1Q9UMD9 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
COL17A1Q9UMD9 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
COL17A1Q9UMD9 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
COL17A1Q9UMD9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC28.81■■■□□ 2.2
COL17A1Q9UMD9 RN7SL606P-201ENST00000472779 293 ntBASIC28.81■■■□□ 2.2
COL17A1Q9UMD9 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC28.81■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms