Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.13■□□□□ 0.81
CDH9Q9ULB4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH9Q9ULB4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
CDH9Q9ULB4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH9Q9ULB4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.12■□□□□ 0.81
CDH9Q9ULB4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.12■□□□□ 0.81
CDH9Q9ULB4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDH9Q9ULB4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH9Q9ULB4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH9Q9ULB4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH9Q9ULB4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CDH9Q9ULB4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDH9Q9ULB4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.12■□□□□ 0.81
CDH9Q9ULB4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH9Q9ULB4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDH9Q9ULB4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.12■□□□□ 0.81
CDH9Q9ULB4 AC008622.2-201ENST00000617006 1229 ntBASIC20.12■□□□□ 0.81
CDH9Q9ULB4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.12■□□□□ 0.81
CDH9Q9ULB4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.12■□□□□ 0.81
CDH9Q9ULB4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CDH9Q9ULB4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.12■□□□□ 0.81
CDH9Q9ULB4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH9Q9ULB4 AC007952.6-201ENST00000573168 2673 ntBASIC20.12■□□□□ 0.81
CDH9Q9ULB4 AC003957.1-201ENST00000625108 2673 ntBASIC20.12■□□□□ 0.81
CDH9Q9ULB4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.12■□□□□ 0.81
CDH9Q9ULB4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.12■□□□□ 0.81
CDH9Q9ULB4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
CDH9Q9ULB4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CDH9Q9ULB4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.12■□□□□ 0.81
CDH9Q9ULB4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDH9Q9ULB4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDH9Q9ULB4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.12■□□□□ 0.81
CDH9Q9ULB4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH9Q9ULB4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CDH9Q9ULB4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH9Q9ULB4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH9Q9ULB4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CDH9Q9ULB4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH9Q9ULB4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH9Q9ULB4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.11■□□□□ 0.81
CDH9Q9ULB4 BX664615.1-201ENST00000443558 458 ntBASIC20.11■□□□□ 0.81
CDH9Q9ULB4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.11■□□□□ 0.81
CDH9Q9ULB4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.11■□□□□ 0.81
CDH9Q9ULB4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.11■□□□□ 0.81
CDH9Q9ULB4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDH9Q9ULB4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
CDH9Q9ULB4 FP475955.4-201ENST00000623131 1990 ntBASIC20.11■□□□□ 0.81
CDH9Q9ULB4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.11■□□□□ 0.81
CDH9Q9ULB4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH9Q9ULB4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDH9Q9ULB4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CDH9Q9ULB4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH9Q9ULB4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CDH9Q9ULB4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.1■□□□□ 0.81
CDH9Q9ULB4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CDH9Q9ULB4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH9Q9ULB4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CDH9Q9ULB4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CDH9Q9ULB4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.1■□□□□ 0.81
CDH9Q9ULB4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH9Q9ULB4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.1■□□□□ 0.81
CDH9Q9ULB4 MIR4674-201ENST00000582457 87 ntBASIC20.1■□□□□ 0.81
CDH9Q9ULB4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.1■□□□□ 0.81
CDH9Q9ULB4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH9Q9ULB4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH9Q9ULB4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH9Q9ULB4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.1■□□□□ 0.81
CDH9Q9ULB4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH9Q9ULB4 KRT8P45-201ENST00000414328 1447 ntBASIC20.1■□□□□ 0.81
CDH9Q9ULB4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.1■□□□□ 0.81
CDH9Q9ULB4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH9Q9ULB4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.1■□□□□ 0.81
CDH9Q9ULB4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH9Q9ULB4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.09■□□□□ 0.81
CDH9Q9ULB4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CDH9Q9ULB4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CDH9Q9ULB4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH9Q9ULB4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH9Q9ULB4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.09■□□□□ 0.81
CDH9Q9ULB4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.09■□□□□ 0.81
CDH9Q9ULB4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH9Q9ULB4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH9Q9ULB4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH9Q9ULB4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH9Q9ULB4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH9Q9ULB4 MIR1224-201ENST00000408193 85 ntBASIC20.09■□□□□ 0.81
CDH9Q9ULB4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.09■□□□□ 0.81
CDH9Q9ULB4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH9Q9ULB4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.09■□□□□ 0.81
CDH9Q9ULB4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.09■□□□□ 0.81
CDH9Q9ULB4 AC141257.4-201ENST00000634557 245 ntBASIC20.09■□□□□ 0.81
CDH9Q9ULB4 AC136944.6-201ENST00000634818 245 ntBASIC20.09■□□□□ 0.81
CDH9Q9ULB4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDH9Q9ULB4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.09■□□□□ 0.81
CDH9Q9ULB4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.09■□□□□ 0.81
CDH9Q9ULB4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.09■□□□□ 0.81
CDH9Q9ULB4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
CDH9Q9ULB4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CDH9Q9ULB4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CDH9Q9ULB4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms