Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 AIRN-201ENST00000601203 4374 ntBASIC17.92■□□□□ 0.46
CTSFQ9UBX1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CTSFQ9UBX1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTSFQ9UBX1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.91■□□□□ 0.46
CTSFQ9UBX1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTSFQ9UBX1 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.91■□□□□ 0.46
CTSFQ9UBX1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTSFQ9UBX1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CTSFQ9UBX1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTSFQ9UBX1 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTSFQ9UBX1 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CTSFQ9UBX1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTSFQ9UBX1 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.91■□□□□ 0.46
CTSFQ9UBX1 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CTSFQ9UBX1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.91■□□□□ 0.46
CTSFQ9UBX1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CTSFQ9UBX1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTSFQ9UBX1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
CTSFQ9UBX1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.91■□□□□ 0.46
CTSFQ9UBX1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.91■□□□□ 0.46
CTSFQ9UBX1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTSFQ9UBX1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTSFQ9UBX1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CTSFQ9UBX1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CTSFQ9UBX1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTSFQ9UBX1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CTSFQ9UBX1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTSFQ9UBX1 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTSFQ9UBX1 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTSFQ9UBX1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CTSFQ9UBX1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTSFQ9UBX1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
CTSFQ9UBX1 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.9■□□□□ 0.46
CTSFQ9UBX1 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.9■□□□□ 0.46
CTSFQ9UBX1 BX664615.1-201ENST00000443558 458 ntBASIC17.9■□□□□ 0.46
CTSFQ9UBX1 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.9■□□□□ 0.46
CTSFQ9UBX1 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.9■□□□□ 0.46
CTSFQ9UBX1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.9■□□□□ 0.46
CTSFQ9UBX1 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CTSFQ9UBX1 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CTSFQ9UBX1 AL590326.2-201ENST00000625139 305 ntBASIC17.9■□□□□ 0.46
CTSFQ9UBX1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTSFQ9UBX1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTSFQ9UBX1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTSFQ9UBX1 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTSFQ9UBX1 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTSFQ9UBX1 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTSFQ9UBX1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTSFQ9UBX1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.9■□□□□ 0.46
CTSFQ9UBX1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.9■□□□□ 0.46
CTSFQ9UBX1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CTSFQ9UBX1 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.89■□□□□ 0.45
CTSFQ9UBX1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTSFQ9UBX1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTSFQ9UBX1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTSFQ9UBX1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.89■□□□□ 0.45
CTSFQ9UBX1 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTSFQ9UBX1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTSFQ9UBX1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.89■□□□□ 0.45
CTSFQ9UBX1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.89■□□□□ 0.45
CTSFQ9UBX1 AC117947.1-201ENST00000427448 529 ntBASIC17.89■□□□□ 0.45
CTSFQ9UBX1 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.89■□□□□ 0.45
CTSFQ9UBX1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.89■□□□□ 0.45
CTSFQ9UBX1 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.89■□□□□ 0.45
CTSFQ9UBX1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CTSFQ9UBX1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
CTSFQ9UBX1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTSFQ9UBX1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTSFQ9UBX1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CTSFQ9UBX1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CTSFQ9UBX1 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTSFQ9UBX1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTSFQ9UBX1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTSFQ9UBX1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.89■□□□□ 0.45
CTSFQ9UBX1 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTSFQ9UBX1 KRT8P45-201ENST00000414328 1447 ntBASIC17.89■□□□□ 0.45
CTSFQ9UBX1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTSFQ9UBX1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTSFQ9UBX1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.88■□□□□ 0.45
CTSFQ9UBX1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTSFQ9UBX1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CTSFQ9UBX1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.88■□□□□ 0.45
CTSFQ9UBX1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTSFQ9UBX1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTSFQ9UBX1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CTSFQ9UBX1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTSFQ9UBX1 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTSFQ9UBX1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTSFQ9UBX1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.88■□□□□ 0.45
CTSFQ9UBX1 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CTSFQ9UBX1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CTSFQ9UBX1 AK4P3-201ENST00000418260 669 ntBASIC17.88■□□□□ 0.45
CTSFQ9UBX1 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.88■□□□□ 0.45
CTSFQ9UBX1 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTSFQ9UBX1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CTSFQ9UBX1 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.88■□□□□ 0.45
CTSFQ9UBX1 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.88■□□□□ 0.45
CTSFQ9UBX1 WWOX-216ENST00000569818 525 ntBASIC17.88■□□□□ 0.45
CTSFQ9UBX1 MIR4674-201ENST00000582457 87 ntBASIC17.88■□□□□ 0.45
CTSFQ9UBX1 AC139887.4-201ENST00000607877 719 ntBASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms