Protein–RNA interactions for Protein: Q9NXE8

CWC25, Pre-mRNA-splicing factor CWC25 homolog, humanhuman

Predicted RBP Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CWC25Q9NXE8 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CWC25Q9NXE8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC23.8■■□□□ 1.4
CWC25Q9NXE8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CWC25Q9NXE8 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CWC25Q9NXE8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CWC25Q9NXE8 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CWC25Q9NXE8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC23.79■■□□□ 1.4
CWC25Q9NXE8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
CWC25Q9NXE8 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CWC25Q9NXE8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CWC25Q9NXE8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CWC25Q9NXE8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC23.79■■□□□ 1.4
CWC25Q9NXE8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC23.79■■□□□ 1.4
CWC25Q9NXE8 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CWC25Q9NXE8 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC23.79■■□□□ 1.4
CWC25Q9NXE8 GCSHP2-201ENST00000560971 527 ntBASIC23.79■■□□□ 1.4
CWC25Q9NXE8 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CWC25Q9NXE8 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC23.79■■□□□ 1.4
CWC25Q9NXE8 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
CWC25Q9NXE8 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
CWC25Q9NXE8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CWC25Q9NXE8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CWC25Q9NXE8 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC23.79■■□□□ 1.4
CWC25Q9NXE8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CWC25Q9NXE8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
CWC25Q9NXE8 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
CWC25Q9NXE8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CWC25Q9NXE8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC23.79■■□□□ 1.4
CWC25Q9NXE8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CWC25Q9NXE8 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CWC25Q9NXE8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CWC25Q9NXE8 POLI-202ENST00000406285 2030 ntTSL 2 BASIC23.78■■□□□ 1.4
CWC25Q9NXE8 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
CWC25Q9NXE8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC23.78■■□□□ 1.4
CWC25Q9NXE8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CWC25Q9NXE8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC23.78■■□□□ 1.4
CWC25Q9NXE8 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CWC25Q9NXE8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC23.78■■□□□ 1.4
CWC25Q9NXE8 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC23.78■■□□□ 1.4
CWC25Q9NXE8 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC23.78■■□□□ 1.4
CWC25Q9NXE8 AL358472.4-201ENST00000633140 710 ntBASIC23.78■■□□□ 1.4
CWC25Q9NXE8 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
CWC25Q9NXE8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CWC25Q9NXE8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CWC25Q9NXE8 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CWC25Q9NXE8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC23.77■■□□□ 1.4
CWC25Q9NXE8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CWC25Q9NXE8 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC23.77■■□□□ 1.4
CWC25Q9NXE8 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CWC25Q9NXE8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC23.77■■□□□ 1.4
CWC25Q9NXE8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
CWC25Q9NXE8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CWC25Q9NXE8 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC23.77■■□□□ 1.4
CWC25Q9NXE8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC23.77■■□□□ 1.4
CWC25Q9NXE8 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC23.77■■□□□ 1.4
CWC25Q9NXE8 SNX5-210ENST00000481323 562 ntTSL 3 BASIC23.77■■□□□ 1.4
CWC25Q9NXE8 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CWC25Q9NXE8 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC23.77■■□□□ 1.4
CWC25Q9NXE8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC23.77■■□□□ 1.4
CWC25Q9NXE8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CWC25Q9NXE8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CWC25Q9NXE8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC23.77■■□□□ 1.4
CWC25Q9NXE8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CWC25Q9NXE8 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CWC25Q9NXE8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CWC25Q9NXE8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CWC25Q9NXE8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC23.76■■□□□ 1.39
CWC25Q9NXE8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CWC25Q9NXE8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CWC25Q9NXE8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CWC25Q9NXE8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CWC25Q9NXE8 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
CWC25Q9NXE8 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CWC25Q9NXE8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC23.76■■□□□ 1.39
CWC25Q9NXE8 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CWC25Q9NXE8 GAD2-202ENST00000376248 680 ntTSL 5 BASIC23.76■■□□□ 1.39
CWC25Q9NXE8 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CWC25Q9NXE8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC23.76■■□□□ 1.39
CWC25Q9NXE8 AL671277.2-201ENST00000458060 996 ntBASIC23.76■■□□□ 1.39
CWC25Q9NXE8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC23.76■■□□□ 1.39
CWC25Q9NXE8 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CWC25Q9NXE8 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC23.76■■□□□ 1.39
CWC25Q9NXE8 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC23.76■■□□□ 1.39
CWC25Q9NXE8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC23.76■■□□□ 1.39
CWC25Q9NXE8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CWC25Q9NXE8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC23.76■■□□□ 1.39
CWC25Q9NXE8 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
CWC25Q9NXE8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC23.76■■□□□ 1.39
CWC25Q9NXE8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CWC25Q9NXE8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CWC25Q9NXE8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CWC25Q9NXE8 AC036111.1-201ENST00000533973 1582 ntBASIC23.75■■□□□ 1.39
CWC25Q9NXE8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC23.75■■□□□ 1.39
CWC25Q9NXE8 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC23.75■■□□□ 1.39
CWC25Q9NXE8 MCCD1P1-208ENST00000445732 328 ntBASIC23.75■■□□□ 1.39
CWC25Q9NXE8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC23.75■■□□□ 1.39
CWC25Q9NXE8 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC23.75■■□□□ 1.39
CWC25Q9NXE8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
CWC25Q9NXE8 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CWC25Q9NXE8 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms