Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.66■□□□□ 0.42
HPF1Q9NWY4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 FAM210CP-201ENST00000445714 574 ntBASIC17.65■□□□□ 0.42
HPF1Q9NWY4 KRT18P21-201ENST00000515767 1272 ntBASIC17.65■□□□□ 0.42
HPF1Q9NWY4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 EGLN1P1-201ENST00000531623 762 ntBASIC17.65■□□□□ 0.42
HPF1Q9NWY4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPF1Q9NWY4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
HPF1Q9NWY4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
HPF1Q9NWY4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HPF1Q9NWY4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
HPF1Q9NWY4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HPF1Q9NWY4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPF1Q9NWY4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HPF1Q9NWY4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.64■□□□□ 0.41
HPF1Q9NWY4 TSPY14P-201ENST00000303979 915 ntBASIC17.64■□□□□ 0.41
HPF1Q9NWY4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPF1Q9NWY4 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.64■□□□□ 0.41
HPF1Q9NWY4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.64■□□□□ 0.41
HPF1Q9NWY4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.64■□□□□ 0.41
HPF1Q9NWY4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.64■□□□□ 0.41
HPF1Q9NWY4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.64■□□□□ 0.41
HPF1Q9NWY4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.64■□□□□ 0.41
HPF1Q9NWY4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.64■□□□□ 0.41
HPF1Q9NWY4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPF1Q9NWY4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HPF1Q9NWY4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.64■□□□□ 0.41
HPF1Q9NWY4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HPF1Q9NWY4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPF1Q9NWY4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.63■□□□□ 0.41
HPF1Q9NWY4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HPF1Q9NWY4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
HPF1Q9NWY4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HPF1Q9NWY4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.63■□□□□ 0.41
HPF1Q9NWY4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.63■□□□□ 0.41
HPF1Q9NWY4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPF1Q9NWY4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.63■□□□□ 0.41
HPF1Q9NWY4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HPF1Q9NWY4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPF1Q9NWY4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.63■□□□□ 0.41
HPF1Q9NWY4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.63■□□□□ 0.41
HPF1Q9NWY4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPF1Q9NWY4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPF1Q9NWY4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPF1Q9NWY4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HPF1Q9NWY4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPF1Q9NWY4 CCR12P-201ENST00000446203 998 ntBASIC17.63■□□□□ 0.41
HPF1Q9NWY4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.63■□□□□ 0.41
HPF1Q9NWY4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
HPF1Q9NWY4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.63■□□□□ 0.41
HPF1Q9NWY4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
HPF1Q9NWY4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.63■□□□□ 0.41
HPF1Q9NWY4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.63■□□□□ 0.41
HPF1Q9NWY4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.63■□□□□ 0.41
HPF1Q9NWY4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HPF1Q9NWY4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPF1Q9NWY4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HPF1Q9NWY4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPF1Q9NWY4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPF1Q9NWY4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPF1Q9NWY4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPF1Q9NWY4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
HPF1Q9NWY4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
HPF1Q9NWY4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.62■□□□□ 0.41
HPF1Q9NWY4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HPF1Q9NWY4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPF1Q9NWY4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.62■□□□□ 0.41
HPF1Q9NWY4 AL158211.5-201ENST00000623583 2518 ntBASIC17.62■□□□□ 0.41
HPF1Q9NWY4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms