Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.42■□□□□ 0.54
CUEDC1Q9NWM3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CUEDC1Q9NWM3 TSPY15P-201ENST00000457163 923 ntBASIC18.42■□□□□ 0.54
CUEDC1Q9NWM3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.42■□□□□ 0.54
CUEDC1Q9NWM3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CUEDC1Q9NWM3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.42■□□□□ 0.54
CUEDC1Q9NWM3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.42■□□□□ 0.54
CUEDC1Q9NWM3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.42■□□□□ 0.54
CUEDC1Q9NWM3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CUEDC1Q9NWM3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CUEDC1Q9NWM3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.42■□□□□ 0.54
CUEDC1Q9NWM3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.42■□□□□ 0.54
CUEDC1Q9NWM3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CUEDC1Q9NWM3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.42■□□□□ 0.54
CUEDC1Q9NWM3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.42■□□□□ 0.54
CUEDC1Q9NWM3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CUEDC1Q9NWM3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CUEDC1Q9NWM3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CUEDC1Q9NWM3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CUEDC1Q9NWM3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CUEDC1Q9NWM3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CUEDC1Q9NWM3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.41■□□□□ 0.54
CUEDC1Q9NWM3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.41■□□□□ 0.54
CUEDC1Q9NWM3 FAM207BP-201ENST00000447172 505 ntBASIC18.41■□□□□ 0.54
CUEDC1Q9NWM3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
CUEDC1Q9NWM3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.41■□□□□ 0.54
CUEDC1Q9NWM3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.41■□□□□ 0.54
CUEDC1Q9NWM3 AL355075.4-201ENST00000554988 638 ntBASIC18.41■□□□□ 0.54
CUEDC1Q9NWM3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.41■□□□□ 0.54
CUEDC1Q9NWM3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.41■□□□□ 0.54
CUEDC1Q9NWM3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CUEDC1Q9NWM3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CUEDC1Q9NWM3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.41■□□□□ 0.54
CUEDC1Q9NWM3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CUEDC1Q9NWM3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.41■□□□□ 0.54
CUEDC1Q9NWM3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.41■□□□□ 0.54
CUEDC1Q9NWM3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CUEDC1Q9NWM3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.41■□□□□ 0.54
CUEDC1Q9NWM3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.41■□□□□ 0.54
CUEDC1Q9NWM3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CUEDC1Q9NWM3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CUEDC1Q9NWM3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CUEDC1Q9NWM3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CUEDC1Q9NWM3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.4■□□□□ 0.54
CUEDC1Q9NWM3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CUEDC1Q9NWM3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CUEDC1Q9NWM3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CUEDC1Q9NWM3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.4■□□□□ 0.54
CUEDC1Q9NWM3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CUEDC1Q9NWM3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CUEDC1Q9NWM3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.4■□□□□ 0.54
CUEDC1Q9NWM3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CUEDC1Q9NWM3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.4■□□□□ 0.54
CUEDC1Q9NWM3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.4■□□□□ 0.54
CUEDC1Q9NWM3 TSPY21P-201ENST00000433481 731 ntBASIC18.4■□□□□ 0.54
CUEDC1Q9NWM3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CUEDC1Q9NWM3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.4■□□□□ 0.54
CUEDC1Q9NWM3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.4■□□□□ 0.54
CUEDC1Q9NWM3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.4■□□□□ 0.54
CUEDC1Q9NWM3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.4■□□□□ 0.54
CUEDC1Q9NWM3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CUEDC1Q9NWM3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.4■□□□□ 0.54
CUEDC1Q9NWM3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CUEDC1Q9NWM3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CUEDC1Q9NWM3 IRX1P1-201ENST00000438849 1838 ntBASIC18.39■□□□□ 0.54
CUEDC1Q9NWM3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CUEDC1Q9NWM3 AL049812.1-201ENST00000432563 2267 ntBASIC18.39■□□□□ 0.54
CUEDC1Q9NWM3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CUEDC1Q9NWM3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.39■□□□□ 0.53
CUEDC1Q9NWM3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CUEDC1Q9NWM3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CUEDC1Q9NWM3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.39■□□□□ 0.53
CUEDC1Q9NWM3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CUEDC1Q9NWM3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CUEDC1Q9NWM3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CUEDC1Q9NWM3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.39■□□□□ 0.53
CUEDC1Q9NWM3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.39■□□□□ 0.53
CUEDC1Q9NWM3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.39■□□□□ 0.53
CUEDC1Q9NWM3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.39■□□□□ 0.53
CUEDC1Q9NWM3 RBM17P1-201ENST00000453646 1190 ntBASIC18.39■□□□□ 0.53
CUEDC1Q9NWM3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CUEDC1Q9NWM3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.39■□□□□ 0.53
CUEDC1Q9NWM3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CUEDC1Q9NWM3 AL049597.2-201ENST00000565575 961 ntBASIC18.39■□□□□ 0.53
CUEDC1Q9NWM3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.39■□□□□ 0.53
CUEDC1Q9NWM3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CUEDC1Q9NWM3 AL161938.1-201ENST00000569833 2180 ntBASIC18.39■□□□□ 0.53
CUEDC1Q9NWM3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CUEDC1Q9NWM3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CUEDC1Q9NWM3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CUEDC1Q9NWM3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.39■□□□□ 0.53
CUEDC1Q9NWM3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.39■□□□□ 0.53
CUEDC1Q9NWM3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.39■□□□□ 0.53
CUEDC1Q9NWM3 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.39■□□□□ 0.53
CUEDC1Q9NWM3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CUEDC1Q9NWM3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CUEDC1Q9NWM3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CUEDC1Q9NWM3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CUEDC1Q9NWM3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CUEDC1Q9NWM3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms