Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC3Q9BY71 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC3Q9BY71 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.87■□□□□ 0.77
LRRC3Q9BY71 AC005332.1-201ENST00000577698 1310 ntBASIC19.87■□□□□ 0.77
LRRC3Q9BY71 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC3Q9BY71 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC3Q9BY71 STARP1-201ENST00000397973 869 ntBASIC19.87■□□□□ 0.77
LRRC3Q9BY71 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC3Q9BY71 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.87■□□□□ 0.77
LRRC3Q9BY71 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.87■□□□□ 0.77
LRRC3Q9BY71 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.87■□□□□ 0.77
LRRC3Q9BY71 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC3Q9BY71 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.87■□□□□ 0.77
LRRC3Q9BY71 AC116407.4-201ENST00000623319 1061 ntBASIC19.87■□□□□ 0.77
LRRC3Q9BY71 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.87■□□□□ 0.77
LRRC3Q9BY71 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC3Q9BY71 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.87■□□□□ 0.77
LRRC3Q9BY71 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
LRRC3Q9BY71 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.87■□□□□ 0.77
LRRC3Q9BY71 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC3Q9BY71 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
LRRC3Q9BY71 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.86■□□□□ 0.77
LRRC3Q9BY71 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
LRRC3Q9BY71 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.86■□□□□ 0.77
LRRC3Q9BY71 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.86■□□□□ 0.77
LRRC3Q9BY71 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC3Q9BY71 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.86■□□□□ 0.77
LRRC3Q9BY71 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC3Q9BY71 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC3Q9BY71 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC3Q9BY71 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.86■□□□□ 0.77
LRRC3Q9BY71 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.86■□□□□ 0.77
LRRC3Q9BY71 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
LRRC3Q9BY71 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC3Q9BY71 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC3Q9BY71 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.86■□□□□ 0.77
LRRC3Q9BY71 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
LRRC3Q9BY71 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.86■□□□□ 0.77
LRRC3Q9BY71 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.86■□□□□ 0.77
LRRC3Q9BY71 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.86■□□□□ 0.77
LRRC3Q9BY71 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC3Q9BY71 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.86■□□□□ 0.77
LRRC3Q9BY71 AC083849.1-201ENST00000615227 514 ntBASIC19.86■□□□□ 0.77
LRRC3Q9BY71 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC3Q9BY71 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC3Q9BY71 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC3Q9BY71 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC3Q9BY71 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
LRRC3Q9BY71 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.86■□□□□ 0.77
LRRC3Q9BY71 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.86■□□□□ 0.77
LRRC3Q9BY71 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC3Q9BY71 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC3Q9BY71 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC3Q9BY71 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC3Q9BY71 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
LRRC3Q9BY71 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.85■□□□□ 0.77
LRRC3Q9BY71 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.85■□□□□ 0.77
LRRC3Q9BY71 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC3Q9BY71 AC112907.2-201ENST00000448639 330 ntBASIC19.85■□□□□ 0.77
LRRC3Q9BY71 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.85■□□□□ 0.77
LRRC3Q9BY71 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.85■□□□□ 0.77
LRRC3Q9BY71 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.85■□□□□ 0.77
LRRC3Q9BY71 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.85■□□□□ 0.77
LRRC3Q9BY71 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC3Q9BY71 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC3Q9BY71 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.85■□□□□ 0.77
LRRC3Q9BY71 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC3Q9BY71 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC3Q9BY71 GPAT2P1-201ENST00000444924 1672 ntBASIC19.84■□□□□ 0.77
LRRC3Q9BY71 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC3Q9BY71 IER3-202ENST00000376377 1350 ntBASIC19.84■□□□□ 0.77
LRRC3Q9BY71 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC3Q9BY71 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC3Q9BY71 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC3Q9BY71 SPDYE15P-201ENST00000424157 909 ntBASIC19.84■□□□□ 0.77
LRRC3Q9BY71 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.84■□□□□ 0.77
LRRC3Q9BY71 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.84■□□□□ 0.77
LRRC3Q9BY71 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.84■□□□□ 0.77
LRRC3Q9BY71 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.84■□□□□ 0.77
LRRC3Q9BY71 AL136038.3-201ENST00000561909 1096 ntBASIC19.84■□□□□ 0.77
LRRC3Q9BY71 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.84■□□□□ 0.77
LRRC3Q9BY71 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC3Q9BY71 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC3Q9BY71 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC3Q9BY71 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.84■□□□□ 0.77
LRRC3Q9BY71 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC3Q9BY71 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.83■□□□□ 0.77
LRRC3Q9BY71 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC3Q9BY71 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
LRRC3Q9BY71 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC3Q9BY71 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.83■□□□□ 0.77
LRRC3Q9BY71 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.83■□□□□ 0.77
LRRC3Q9BY71 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
LRRC3Q9BY71 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.83■□□□□ 0.77
LRRC3Q9BY71 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
LRRC3Q9BY71 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC3Q9BY71 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
LRRC3Q9BY71 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC3Q9BY71 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC3Q9BY71 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms