Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RTFDC1Q9BY42 GRAMD4P1-201ENST00000435181 1110 ntBASIC23.14■■□□□ 1.29
RTFDC1Q9BY42 AP000347.1-202ENST00000435868 847 ntBASIC23.14■■□□□ 1.29
RTFDC1Q9BY42 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RTFDC1Q9BY42 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC23.14■■□□□ 1.29
RTFDC1Q9BY42 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
RTFDC1Q9BY42 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC23.14■■□□□ 1.29
RTFDC1Q9BY42 SPEG-225ENST00000617028 815 ntTSL 5 BASIC23.14■■□□□ 1.29
RTFDC1Q9BY42 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RTFDC1Q9BY42 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RTFDC1Q9BY42 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RTFDC1Q9BY42 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RTFDC1Q9BY42 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC23.14■■□□□ 1.29
RTFDC1Q9BY42 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC23.14■■□□□ 1.29
RTFDC1Q9BY42 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RTFDC1Q9BY42 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.13■■□□□ 1.29
RTFDC1Q9BY42 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC23.13■■□□□ 1.29
RTFDC1Q9BY42 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RTFDC1Q9BY42 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RTFDC1Q9BY42 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RTFDC1Q9BY42 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RTFDC1Q9BY42 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC23.13■■□□□ 1.29
RTFDC1Q9BY42 SDHAP1-207ENST00000440850 2000 ntBASIC23.13■■□□□ 1.29
RTFDC1Q9BY42 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RTFDC1Q9BY42 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
RTFDC1Q9BY42 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RTFDC1Q9BY42 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RTFDC1Q9BY42 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
RTFDC1Q9BY42 TSPY19P-201ENST00000418461 509 ntBASIC23.13■■□□□ 1.29
RTFDC1Q9BY42 TSPY18P-201ENST00000441642 509 ntBASIC23.13■■□□□ 1.29
RTFDC1Q9BY42 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC23.13■■□□□ 1.29
RTFDC1Q9BY42 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
RTFDC1Q9BY42 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
RTFDC1Q9BY42 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RTFDC1Q9BY42 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RTFDC1Q9BY42 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.13■■□□□ 1.29
RTFDC1Q9BY42 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RTFDC1Q9BY42 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23.13■■□□□ 1.29
RTFDC1Q9BY42 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RTFDC1Q9BY42 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RTFDC1Q9BY42 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
RTFDC1Q9BY42 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC23.12■■□□□ 1.29
RTFDC1Q9BY42 GAS2L1P1-201ENST00000420145 1480 ntBASIC23.12■■□□□ 1.29
RTFDC1Q9BY42 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC23.12■■□□□ 1.29
RTFDC1Q9BY42 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
RTFDC1Q9BY42 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RTFDC1Q9BY42 MCCD1P1-208ENST00000445732 328 ntBASIC23.12■■□□□ 1.29
RTFDC1Q9BY42 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RTFDC1Q9BY42 MIR3917-201ENST00000580971 93 ntBASIC23.12■■□□□ 1.29
RTFDC1Q9BY42 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
RTFDC1Q9BY42 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC23.12■■□□□ 1.29
RTFDC1Q9BY42 AL157888.1-201ENST00000631930 593 ntBASIC23.12■■□□□ 1.29
RTFDC1Q9BY42 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC23.12■■□□□ 1.29
RTFDC1Q9BY42 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
RTFDC1Q9BY42 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
RTFDC1Q9BY42 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
RTFDC1Q9BY42 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC23.11■■□□□ 1.29
RTFDC1Q9BY42 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RTFDC1Q9BY42 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
RTFDC1Q9BY42 KRT8P3-201ENST00000519669 1449 ntBASIC23.11■■□□□ 1.29
RTFDC1Q9BY42 DRAXINP1-201ENST00000437611 948 ntBASIC23.11■■□□□ 1.29
RTFDC1Q9BY42 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC23.11■■□□□ 1.29
RTFDC1Q9BY42 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC23.11■■□□□ 1.29
RTFDC1Q9BY42 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC23.11■■□□□ 1.29
RTFDC1Q9BY42 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC23.11■■□□□ 1.29
RTFDC1Q9BY42 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC23.11■■□□□ 1.29
RTFDC1Q9BY42 NAA38-203ENST00000575071 553 ntTSL 2 BASIC23.11■■□□□ 1.29
RTFDC1Q9BY42 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
RTFDC1Q9BY42 IL11-204ENST00000590625 1028 ntTSL 2 BASIC23.11■■□□□ 1.29
RTFDC1Q9BY42 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
RTFDC1Q9BY42 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RTFDC1Q9BY42 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC23.11■■□□□ 1.29
RTFDC1Q9BY42 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC23.11■■□□□ 1.29
RTFDC1Q9BY42 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RTFDC1Q9BY42 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RTFDC1Q9BY42 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC23.11■■□□□ 1.29
RTFDC1Q9BY42 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RTFDC1Q9BY42 AL391807.1-203ENST00000604392 2365 ntBASIC23.11■■□□□ 1.29
RTFDC1Q9BY42 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RTFDC1Q9BY42 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC23.1■■□□□ 1.29
RTFDC1Q9BY42 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RTFDC1Q9BY42 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
RTFDC1Q9BY42 GOLGA6L5P-202ENST00000515341 1828 ntBASIC23.1■■□□□ 1.29
RTFDC1Q9BY42 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC23.1■■□□□ 1.29
RTFDC1Q9BY42 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RTFDC1Q9BY42 AC112907.3-201ENST00000577781 2400 ntBASIC23.1■■□□□ 1.29
RTFDC1Q9BY42 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
RTFDC1Q9BY42 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RTFDC1Q9BY42 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RTFDC1Q9BY42 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RTFDC1Q9BY42 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RTFDC1Q9BY42 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC23.1■■□□□ 1.29
RTFDC1Q9BY42 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
RTFDC1Q9BY42 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC23.1■■□□□ 1.29
RTFDC1Q9BY42 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC23.1■■□□□ 1.29
RTFDC1Q9BY42 AC104692.2-201ENST00000603054 253 ntBASIC23.1■■□□□ 1.29
RTFDC1Q9BY42 AL136038.4-201ENST00000603606 1261 ntBASIC23.1■■□□□ 1.29
RTFDC1Q9BY42 IFNL4P1-201ENST00000607083 540 ntBASIC23.1■■□□□ 1.29
RTFDC1Q9BY42 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
RTFDC1Q9BY42 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms