Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
CALR3Q96L12 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CALR3Q96L12 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CALR3Q96L12 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.14■□□□□ 0.81
CALR3Q96L12 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.14■□□□□ 0.81
CALR3Q96L12 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.14■□□□□ 0.81
CALR3Q96L12 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.14■□□□□ 0.81
CALR3Q96L12 AC083880.1-201ENST00000608266 535 ntBASIC20.14■□□□□ 0.81
CALR3Q96L12 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.14■□□□□ 0.81
CALR3Q96L12 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.14■□□□□ 0.81
CALR3Q96L12 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.14■□□□□ 0.81
CALR3Q96L12 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
CALR3Q96L12 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CALR3Q96L12 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CALR3Q96L12 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CALR3Q96L12 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CALR3Q96L12 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.13■□□□□ 0.81
CALR3Q96L12 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.13■□□□□ 0.81
CALR3Q96L12 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CALR3Q96L12 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.13■□□□□ 0.81
CALR3Q96L12 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.13■□□□□ 0.81
CALR3Q96L12 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CALR3Q96L12 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CALR3Q96L12 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CALR3Q96L12 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.13■□□□□ 0.81
CALR3Q96L12 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CALR3Q96L12 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CALR3Q96L12 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CALR3Q96L12 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.13■□□□□ 0.81
CALR3Q96L12 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.13■□□□□ 0.81
CALR3Q96L12 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.13■□□□□ 0.81
CALR3Q96L12 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.13■□□□□ 0.81
CALR3Q96L12 UNC93B4-201ENST00000505679 747 ntBASIC20.13■□□□□ 0.81
CALR3Q96L12 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.13■□□□□ 0.81
CALR3Q96L12 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CALR3Q96L12 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.13■□□□□ 0.81
CALR3Q96L12 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.13■□□□□ 0.81
CALR3Q96L12 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.13■□□□□ 0.81
CALR3Q96L12 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CALR3Q96L12 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CALR3Q96L12 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CALR3Q96L12 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CALR3Q96L12 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.13■□□□□ 0.81
CALR3Q96L12 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.13■□□□□ 0.81
CALR3Q96L12 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CALR3Q96L12 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CALR3Q96L12 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CALR3Q96L12 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.13■□□□□ 0.81
CALR3Q96L12 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CALR3Q96L12 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CALR3Q96L12 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.13■□□□□ 0.81
CALR3Q96L12 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CALR3Q96L12 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.12■□□□□ 0.81
CALR3Q96L12 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
CALR3Q96L12 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.12■□□□□ 0.81
CALR3Q96L12 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CALR3Q96L12 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CALR3Q96L12 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.12■□□□□ 0.81
CALR3Q96L12 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.12■□□□□ 0.81
CALR3Q96L12 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.12■□□□□ 0.81
CALR3Q96L12 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CALR3Q96L12 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CALR3Q96L12 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.12■□□□□ 0.81
CALR3Q96L12 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
CALR3Q96L12 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.12■□□□□ 0.81
CALR3Q96L12 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CALR3Q96L12 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CALR3Q96L12 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.12■□□□□ 0.81
CALR3Q96L12 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.12■□□□□ 0.81
CALR3Q96L12 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CALR3Q96L12 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CALR3Q96L12 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CALR3Q96L12 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CALR3Q96L12 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
CALR3Q96L12 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CALR3Q96L12 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CALR3Q96L12 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CALR3Q96L12 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CALR3Q96L12 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.12■□□□□ 0.81
CALR3Q96L12 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CALR3Q96L12 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CALR3Q96L12 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CALR3Q96L12 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CALR3Q96L12 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CALR3Q96L12 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.11■□□□□ 0.81
CALR3Q96L12 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CALR3Q96L12 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CALR3Q96L12 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CALR3Q96L12 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.11■□□□□ 0.81
CALR3Q96L12 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CALR3Q96L12 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CALR3Q96L12 ANO7L1-203ENST00000602586 1720 ntBASIC20.11■□□□□ 0.81
CALR3Q96L12 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CALR3Q96L12 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CALR3Q96L12 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CALR3Q96L12 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CALR3Q96L12 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CALR3Q96L12 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CALR3Q96L12 POM121L13P-201ENST00000422362 380 ntBASIC20.11■□□□□ 0.81
CALR3Q96L12 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms