Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
CHMP6Q96FZ7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.17■□□□□ 0.66
CHMP6Q96FZ7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.17■□□□□ 0.66
CHMP6Q96FZ7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.17■□□□□ 0.66
CHMP6Q96FZ7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.17■□□□□ 0.66
CHMP6Q96FZ7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP6Q96FZ7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.17■□□□□ 0.66
CHMP6Q96FZ7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.17■□□□□ 0.66
CHMP6Q96FZ7 RARRES2P6-201ENST00000567333 442 ntBASIC19.17■□□□□ 0.66
CHMP6Q96FZ7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP6Q96FZ7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP6Q96FZ7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP6Q96FZ7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP6Q96FZ7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP6Q96FZ7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP6Q96FZ7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
CHMP6Q96FZ7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP6Q96FZ7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CHMP6Q96FZ7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP6Q96FZ7 AC099398.1-201ENST00000567919 2776 ntBASIC19.16■□□□□ 0.66
CHMP6Q96FZ7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP6Q96FZ7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP6Q96FZ7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP6Q96FZ7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP6Q96FZ7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.16■□□□□ 0.66
CHMP6Q96FZ7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CHMP6Q96FZ7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.16■□□□□ 0.66
CHMP6Q96FZ7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CHMP6Q96FZ7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.16■□□□□ 0.66
CHMP6Q96FZ7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.16■□□□□ 0.66
CHMP6Q96FZ7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.16■□□□□ 0.66
CHMP6Q96FZ7 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.16■□□□□ 0.66
CHMP6Q96FZ7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.16■□□□□ 0.66
CHMP6Q96FZ7 MYCNOS-205ENST00000641950 531 ntBASIC19.16■□□□□ 0.66
CHMP6Q96FZ7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.16■□□□□ 0.66
CHMP6Q96FZ7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP6Q96FZ7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP6Q96FZ7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP6Q96FZ7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP6Q96FZ7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP6Q96FZ7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP6Q96FZ7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP6Q96FZ7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP6Q96FZ7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.15■□□□□ 0.66
CHMP6Q96FZ7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CHMP6Q96FZ7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP6Q96FZ7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP6Q96FZ7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CHMP6Q96FZ7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CHMP6Q96FZ7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP6Q96FZ7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP6Q96FZ7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP6Q96FZ7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.15■□□□□ 0.66
CHMP6Q96FZ7 AC016769.1-201ENST00000409132 1010 ntBASIC19.15■□□□□ 0.66
CHMP6Q96FZ7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP6Q96FZ7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP6Q96FZ7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP6Q96FZ7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.15■□□□□ 0.66
CHMP6Q96FZ7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.15■□□□□ 0.66
CHMP6Q96FZ7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP6Q96FZ7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP6Q96FZ7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP6Q96FZ7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
CHMP6Q96FZ7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CHMP6Q96FZ7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP6Q96FZ7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP6Q96FZ7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.15■□□□□ 0.66
CHMP6Q96FZ7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP6Q96FZ7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CHMP6Q96FZ7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.14■□□□□ 0.66
CHMP6Q96FZ7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.66
CHMP6Q96FZ7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CHMP6Q96FZ7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.14■□□□□ 0.66
CHMP6Q96FZ7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHMP6Q96FZ7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.14■□□□□ 0.66
CHMP6Q96FZ7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHMP6Q96FZ7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHMP6Q96FZ7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
CHMP6Q96FZ7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP6Q96FZ7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CHMP6Q96FZ7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP6Q96FZ7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.14■□□□□ 0.65
CHMP6Q96FZ7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP6Q96FZ7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP6Q96FZ7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.14■□□□□ 0.65
CHMP6Q96FZ7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.14■□□□□ 0.65
CHMP6Q96FZ7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.14■□□□□ 0.65
CHMP6Q96FZ7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CHMP6Q96FZ7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.14■□□□□ 0.65
CHMP6Q96FZ7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP6Q96FZ7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP6Q96FZ7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.14■□□□□ 0.65
CHMP6Q96FZ7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.14■□□□□ 0.65
CHMP6Q96FZ7 AC009053.2-201ENST00000563701 2365 ntBASIC19.14■□□□□ 0.65
CHMP6Q96FZ7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP6Q96FZ7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.14■□□□□ 0.65
CHMP6Q96FZ7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP6Q96FZ7 AL162741.1-201ENST00000565563 1558 ntBASIC19.14■□□□□ 0.65
CHMP6Q96FZ7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.14■□□□□ 0.65
CHMP6Q96FZ7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms