Protein–RNA interactions for Protein: Q96FI4

NEIL1, Endonuclease 8-like 1, humanhuman

Predicted RBP Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1Q96FI4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.07■□□□□ 0.16
NEIL1Q96FI4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NEIL1Q96FI4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.07■□□□□ 0.16
NEIL1Q96FI4 AP000974.1-201ENST00000623909 2387 ntBASIC16.07■□□□□ 0.16
NEIL1Q96FI4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.07■□□□□ 0.16
NEIL1Q96FI4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NEIL1Q96FI4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NEIL1Q96FI4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.06■□□□□ 0.16
NEIL1Q96FI4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NEIL1Q96FI4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NEIL1Q96FI4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NEIL1Q96FI4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.06■□□□□ 0.16
NEIL1Q96FI4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.06■□□□□ 0.16
NEIL1Q96FI4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.06■□□□□ 0.16
NEIL1Q96FI4 AC079598.2-202ENST00000546624 1451 ntBASIC16.06■□□□□ 0.16
NEIL1Q96FI4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NEIL1Q96FI4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
NEIL1Q96FI4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.06■□□□□ 0.16
NEIL1Q96FI4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NEIL1Q96FI4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NEIL1Q96FI4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NEIL1Q96FI4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NEIL1Q96FI4 MESTP1-201ENST00000404287 994 ntBASIC16.06■□□□□ 0.16
NEIL1Q96FI4 MIR1238-201ENST00000408483 83 ntBASIC16.06■□□□□ 0.16
NEIL1Q96FI4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.06■□□□□ 0.16
NEIL1Q96FI4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NEIL1Q96FI4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.06■□□□□ 0.16
NEIL1Q96FI4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NEIL1Q96FI4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NEIL1Q96FI4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.06■□□□□ 0.16
NEIL1Q96FI4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.06■□□□□ 0.16
NEIL1Q96FI4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.06■□□□□ 0.16
NEIL1Q96FI4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.06■□□□□ 0.16
NEIL1Q96FI4 AP000525.1-201ENST00000608286 694 ntBASIC16.06■□□□□ 0.16
NEIL1Q96FI4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.06■□□□□ 0.16
NEIL1Q96FI4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NEIL1Q96FI4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.06■□□□□ 0.16
NEIL1Q96FI4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NEIL1Q96FI4 BCL2-203ENST00000589955 5011 ntBASIC16.06■□□□□ 0.16
NEIL1Q96FI4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NEIL1Q96FI4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NEIL1Q96FI4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.05■□□□□ 0.16
NEIL1Q96FI4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
NEIL1Q96FI4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NEIL1Q96FI4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.05■□□□□ 0.16
NEIL1Q96FI4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.05■□□□□ 0.16
NEIL1Q96FI4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NEIL1Q96FI4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.05■□□□□ 0.16
NEIL1Q96FI4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NEIL1Q96FI4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NEIL1Q96FI4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NEIL1Q96FI4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
NEIL1Q96FI4 AC087499.1-201ENST00000418141 1075 ntBASIC16.05■□□□□ 0.16
NEIL1Q96FI4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NEIL1Q96FI4 FAM207BP-201ENST00000447172 505 ntBASIC16.05■□□□□ 0.16
NEIL1Q96FI4 Z85996.1-201ENST00000494644 937 ntBASIC16.05■□□□□ 0.16
NEIL1Q96FI4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.05■□□□□ 0.16
NEIL1Q96FI4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.05■□□□□ 0.16
NEIL1Q96FI4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.05■□□□□ 0.16
NEIL1Q96FI4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.05■□□□□ 0.16
NEIL1Q96FI4 AC130371.2-201ENST00000619443 611 ntBASIC16.05■□□□□ 0.16
NEIL1Q96FI4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NEIL1Q96FI4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NEIL1Q96FI4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NEIL1Q96FI4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NEIL1Q96FI4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NEIL1Q96FI4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NEIL1Q96FI4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NEIL1Q96FI4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
NEIL1Q96FI4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NEIL1Q96FI4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NEIL1Q96FI4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NEIL1Q96FI4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NEIL1Q96FI4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NEIL1Q96FI4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NEIL1Q96FI4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
NEIL1Q96FI4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NEIL1Q96FI4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.04■□□□□ 0.16
NEIL1Q96FI4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NEIL1Q96FI4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NEIL1Q96FI4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
NEIL1Q96FI4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NEIL1Q96FI4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NEIL1Q96FI4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.04■□□□□ 0.16
NEIL1Q96FI4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NEIL1Q96FI4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.04■□□□□ 0.16
NEIL1Q96FI4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NEIL1Q96FI4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.04■□□□□ 0.16
NEIL1Q96FI4 AC097488.1-201ENST00000507834 756 ntBASIC16.04■□□□□ 0.16
NEIL1Q96FI4 FITM1-202ENST00000559294 800 ntBASIC16.04■□□□□ 0.16
NEIL1Q96FI4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.04■□□□□ 0.16
NEIL1Q96FI4 SLC25A1P4-201ENST00000567977 778 ntBASIC16.04■□□□□ 0.16
NEIL1Q96FI4 AP000692.2-201ENST00000608391 879 ntBASIC16.04■□□□□ 0.16
NEIL1Q96FI4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.04■□□□□ 0.16
NEIL1Q96FI4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NEIL1Q96FI4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NEIL1Q96FI4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.04■□□□□ 0.16
NEIL1Q96FI4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NEIL1Q96FI4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
NEIL1Q96FI4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms