Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
USP6NLQ92738 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
USP6NLQ92738 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
USP6NLQ92738 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.54■■□□□ 1.04
USP6NLQ92738 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
USP6NLQ92738 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
USP6NLQ92738 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
USP6NLQ92738 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.54■■□□□ 1.04
USP6NLQ92738 AC036111.1-201ENST00000533973 1582 ntBASIC21.54■■□□□ 1.04
USP6NLQ92738 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
USP6NLQ92738 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
USP6NLQ92738 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
USP6NLQ92738 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
USP6NLQ92738 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
USP6NLQ92738 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.54■■□□□ 1.04
USP6NLQ92738 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.54■■□□□ 1.04
USP6NLQ92738 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.54■■□□□ 1.04
USP6NLQ92738 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.54■■□□□ 1.04
USP6NLQ92738 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.54■■□□□ 1.04
USP6NLQ92738 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.54■■□□□ 1.04
USP6NLQ92738 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
USP6NLQ92738 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
USP6NLQ92738 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
USP6NLQ92738 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
USP6NLQ92738 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.54■■□□□ 1.04
USP6NLQ92738 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.54■■□□□ 1.04
USP6NLQ92738 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
USP6NLQ92738 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
USP6NLQ92738 ZNF815P-204ENST00000434898 1737 ntBASIC21.53■■□□□ 1.04
USP6NLQ92738 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.53■■□□□ 1.04
USP6NLQ92738 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.53■■□□□ 1.04
USP6NLQ92738 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
USP6NLQ92738 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
USP6NLQ92738 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.53■■□□□ 1.04
USP6NLQ92738 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC21.53■■□□□ 1.04
USP6NLQ92738 MIR662-201ENST00000384847 95 ntBASIC21.53■■□□□ 1.04
USP6NLQ92738 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.53■■□□□ 1.04
USP6NLQ92738 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.53■■□□□ 1.04
USP6NLQ92738 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
USP6NLQ92738 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
USP6NLQ92738 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
USP6NLQ92738 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.53■■□□□ 1.04
USP6NLQ92738 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
USP6NLQ92738 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
USP6NLQ92738 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.53■■□□□ 1.04
USP6NLQ92738 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.53■■□□□ 1.04
USP6NLQ92738 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
USP6NLQ92738 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
USP6NLQ92738 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
USP6NLQ92738 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
USP6NLQ92738 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
USP6NLQ92738 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
USP6NLQ92738 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
USP6NLQ92738 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
USP6NLQ92738 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.52■■□□□ 1.04
USP6NLQ92738 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.52■■□□□ 1.04
USP6NLQ92738 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
USP6NLQ92738 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
USP6NLQ92738 TSPY19P-201ENST00000418461 509 ntBASIC21.52■■□□□ 1.04
USP6NLQ92738 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
USP6NLQ92738 CHCHD2P8-201ENST00000429873 447 ntBASIC21.52■■□□□ 1.04
USP6NLQ92738 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
USP6NLQ92738 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
USP6NLQ92738 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
USP6NLQ92738 TSPY18P-201ENST00000441642 509 ntBASIC21.52■■□□□ 1.04
USP6NLQ92738 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
USP6NLQ92738 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
USP6NLQ92738 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.52■■□□□ 1.04
USP6NLQ92738 AC104692.2-201ENST00000603054 253 ntBASIC21.52■■□□□ 1.04
USP6NLQ92738 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC21.52■■□□□ 1.04
USP6NLQ92738 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.52■■□□□ 1.04
USP6NLQ92738 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
USP6NLQ92738 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.52■■□□□ 1.04
USP6NLQ92738 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.52■■□□□ 1.04
USP6NLQ92738 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
USP6NLQ92738 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
USP6NLQ92738 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
USP6NLQ92738 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
USP6NLQ92738 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.52■■□□□ 1.03
USP6NLQ92738 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
USP6NLQ92738 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
USP6NLQ92738 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
USP6NLQ92738 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.51■■□□□ 1.03
USP6NLQ92738 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
USP6NLQ92738 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
USP6NLQ92738 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
USP6NLQ92738 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
USP6NLQ92738 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
USP6NLQ92738 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
USP6NLQ92738 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC21.51■■□□□ 1.03
USP6NLQ92738 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
USP6NLQ92738 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
USP6NLQ92738 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
USP6NLQ92738 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.51■■□□□ 1.03
USP6NLQ92738 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
USP6NLQ92738 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
USP6NLQ92738 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.51■■□□□ 1.03
USP6NLQ92738 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
USP6NLQ92738 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
USP6NLQ92738 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms