Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 TREX1-205ENST00000625293 1783 ntBASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 AL391807.1-203ENST00000604392 2365 ntBASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 MIR658-201ENST00000385210 100 ntBASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 AC114341.1-201ENST00000618070 349 ntBASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 Six3os1_5.1-201ENST00000611000 271 ntBASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
SYNE2Q8WXH0 MINOS1P3-201ENST00000457048 203 ntBASIC7.71□□□□□ -1.17
SYNE2Q8WXH0 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
SYNE2Q8WXH0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
SYNE2Q8WXH0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
SYNE2Q8WXH0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.17
SYNE2Q8WXH0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
SYNE2Q8WXH0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.17
SYNE2Q8WXH0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC7.71□□□□□ -1.17
SYNE2Q8WXH0 RPS29-206ENST00000557111 488 ntTSL 2 BASIC7.71□□□□□ -1.17
SYNE2Q8WXH0 AC027307.3-201ENST00000594262 1100 ntBASIC7.71□□□□□ -1.17
SYNE2Q8WXH0 LINC02560-201ENST00000596379 459 ntBASIC7.71□□□□□ -1.17
SYNE2Q8WXH0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC7.71□□□□□ -1.17
SYNE2Q8WXH0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
SYNE2Q8WXH0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
SYNE2Q8WXH0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC7.71□□□□□ -1.17
SYNE2Q8WXH0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
SYNE2Q8WXH0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC7.71□□□□□ -1.17
SYNE2Q8WXH0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC7.71□□□□□ -1.17
SYNE2Q8WXH0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 AL592071.1-201ENST00000611956 408 ntBASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 RNA5SP423-201ENST00000517127 109 ntBASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 IFT20-216ENST00000588477 774 ntTSL 5 BASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 AC079834.2-201ENST00000609776 1949 ntBASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 HNRNPFP1-201ENST00000391730 1133 ntBASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 RPL28-206ENST00000558752 671 ntTSL 3 BASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 MIR4538-201ENST00000581377 78 ntBASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 AC024563.2-201ENST00000603282 481 ntBASIC7.71□□□□□ -1.18
SYNE2Q8WXH0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 STOM-202ENST00000347359 870 ntTSL 2 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 DAD1-205ENST00000543337 501 ntTSL 3 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms