Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF139Q8WU17 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF139Q8WU17 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF139Q8WU17 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF139Q8WU17 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF139Q8WU17 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF139Q8WU17 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF139Q8WU17 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF139Q8WU17 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF139Q8WU17 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF139Q8WU17 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF139Q8WU17 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF139Q8WU17 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.99■□□□□ 0.79
RNF139Q8WU17 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF139Q8WU17 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.99■□□□□ 0.79
RNF139Q8WU17 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.99■□□□□ 0.79
RNF139Q8WU17 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF139Q8WU17 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF139Q8WU17 KRT8P11-201ENST00000409686 1436 ntBASIC19.99■□□□□ 0.79
RNF139Q8WU17 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF139Q8WU17 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF139Q8WU17 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
RNF139Q8WU17 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RNF139Q8WU17 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF139Q8WU17 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF139Q8WU17 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RNF139Q8WU17 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF139Q8WU17 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF139Q8WU17 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RNF139Q8WU17 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF139Q8WU17 CKBP1-201ENST00000565489 1086 ntBASIC19.98■□□□□ 0.79
RNF139Q8WU17 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF139Q8WU17 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF139Q8WU17 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF139Q8WU17 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF139Q8WU17 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF139Q8WU17 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF139Q8WU17 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF139Q8WU17 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
RNF139Q8WU17 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF139Q8WU17 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF139Q8WU17 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF139Q8WU17 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.97■□□□□ 0.79
RNF139Q8WU17 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF139Q8WU17 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
RNF139Q8WU17 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF139Q8WU17 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RNF139Q8WU17 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF139Q8WU17 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
RNF139Q8WU17 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
RNF139Q8WU17 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF139Q8WU17 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF139Q8WU17 LINC01023-201ENST00000606054 436 ntBASIC19.97■□□□□ 0.79
RNF139Q8WU17 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF139Q8WU17 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF139Q8WU17 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF139Q8WU17 CYP2D8P-201ENST00000433633 1490 ntBASIC19.97■□□□□ 0.79
RNF139Q8WU17 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF139Q8WU17 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF139Q8WU17 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF139Q8WU17 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF139Q8WU17 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF139Q8WU17 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF139Q8WU17 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF139Q8WU17 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF139Q8WU17 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF139Q8WU17 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF139Q8WU17 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF139Q8WU17 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF139Q8WU17 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF139Q8WU17 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF139Q8WU17 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF139Q8WU17 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
RNF139Q8WU17 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF139Q8WU17 ECEL1P3-201ENST00000427961 737 ntBASIC19.96■□□□□ 0.79
RNF139Q8WU17 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.96■□□□□ 0.79
RNF139Q8WU17 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF139Q8WU17 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF139Q8WU17 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RNF139Q8WU17 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RNF139Q8WU17 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RNF139Q8WU17 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF139Q8WU17 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
RNF139Q8WU17 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF139Q8WU17 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF139Q8WU17 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF139Q8WU17 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF139Q8WU17 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF139Q8WU17 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
RNF139Q8WU17 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF139Q8WU17 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF139Q8WU17 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF139Q8WU17 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF139Q8WU17 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF139Q8WU17 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RNF139Q8WU17 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF139Q8WU17 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF139Q8WU17 TEX21P-204ENST00000641479 1693 ntBASIC19.95■□□□□ 0.78
RNF139Q8WU17 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.95■□□□□ 0.78
RNF139Q8WU17 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms