Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SHROOM3Q8TF72 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHROOM3Q8TF72 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHROOM3Q8TF72 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.43■□□□□ 0.7
SHROOM3Q8TF72 CROCCP3-202ENST00000420820 1947 ntBASIC19.43■□□□□ 0.7
SHROOM3Q8TF72 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.43■□□□□ 0.7
SHROOM3Q8TF72 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SHROOM3Q8TF72 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHROOM3Q8TF72 MIR4785-201ENST00000585005 73 ntBASIC19.43■□□□□ 0.7
SHROOM3Q8TF72 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.43■□□□□ 0.7
SHROOM3Q8TF72 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.43■□□□□ 0.7
SHROOM3Q8TF72 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHROOM3Q8TF72 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.42■□□□□ 0.7
SHROOM3Q8TF72 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHROOM3Q8TF72 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.42■□□□□ 0.7
SHROOM3Q8TF72 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.42■□□□□ 0.7
SHROOM3Q8TF72 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SHROOM3Q8TF72 AC096733.2-201ENST00000609937 1394 ntBASIC19.42■□□□□ 0.7
SHROOM3Q8TF72 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHROOM3Q8TF72 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
SHROOM3Q8TF72 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.42■□□□□ 0.7
SHROOM3Q8TF72 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.42■□□□□ 0.7
SHROOM3Q8TF72 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHROOM3Q8TF72 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHROOM3Q8TF72 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.42■□□□□ 0.7
SHROOM3Q8TF72 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHROOM3Q8TF72 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHROOM3Q8TF72 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHROOM3Q8TF72 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SHROOM3Q8TF72 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SHROOM3Q8TF72 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.41■□□□□ 0.7
SHROOM3Q8TF72 TSPY15P-201ENST00000457163 923 ntBASIC19.41■□□□□ 0.7
SHROOM3Q8TF72 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.41■□□□□ 0.7
SHROOM3Q8TF72 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SHROOM3Q8TF72 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.41■□□□□ 0.7
SHROOM3Q8TF72 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SHROOM3Q8TF72 AL020996.1-203ENST00000536896 2307 ntBASIC19.41■□□□□ 0.7
SHROOM3Q8TF72 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SHROOM3Q8TF72 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHROOM3Q8TF72 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.41■□□□□ 0.7
SHROOM3Q8TF72 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHROOM3Q8TF72 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SHROOM3Q8TF72 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHROOM3Q8TF72 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.41■□□□□ 0.7
SHROOM3Q8TF72 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.41■□□□□ 0.7
SHROOM3Q8TF72 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
SHROOM3Q8TF72 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.41■□□□□ 0.7
SHROOM3Q8TF72 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHROOM3Q8TF72 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.41■□□□□ 0.7
SHROOM3Q8TF72 AC036111.1-201ENST00000533973 1582 ntBASIC19.4■□□□□ 0.7
SHROOM3Q8TF72 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHROOM3Q8TF72 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHROOM3Q8TF72 ANO7L1-203ENST00000602586 1720 ntBASIC19.4■□□□□ 0.7
SHROOM3Q8TF72 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHROOM3Q8TF72 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SHROOM3Q8TF72 HEIH-201ENST00000623091 1652 ntBASIC19.4■□□□□ 0.7
SHROOM3Q8TF72 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHROOM3Q8TF72 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHROOM3Q8TF72 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.4■□□□□ 0.7
SHROOM3Q8TF72 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHROOM3Q8TF72 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.4■□□□□ 0.7
SHROOM3Q8TF72 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.4■□□□□ 0.7
SHROOM3Q8TF72 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.4■□□□□ 0.7
SHROOM3Q8TF72 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHROOM3Q8TF72 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.4■□□□□ 0.7
SHROOM3Q8TF72 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
SHROOM3Q8TF72 AC004408.2-201ENST00000623613 2777 ntBASIC19.4■□□□□ 0.7
SHROOM3Q8TF72 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SHROOM3Q8TF72 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHROOM3Q8TF72 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHROOM3Q8TF72 AC079598.2-202ENST00000546624 1451 ntBASIC19.4■□□□□ 0.7
SHROOM3Q8TF72 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHROOM3Q8TF72 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SHROOM3Q8TF72 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
SHROOM3Q8TF72 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SHROOM3Q8TF72 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SHROOM3Q8TF72 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.39■□□□□ 0.7
SHROOM3Q8TF72 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.7
SHROOM3Q8TF72 AC026471.5-201ENST00000615068 467 ntBASIC19.39■□□□□ 0.7
SHROOM3Q8TF72 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SHROOM3Q8TF72 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.39■□□□□ 0.7
SHROOM3Q8TF72 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHROOM3Q8TF72 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
SHROOM3Q8TF72 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.39■□□□□ 0.69
SHROOM3Q8TF72 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.39■□□□□ 0.69
SHROOM3Q8TF72 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHROOM3Q8TF72 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.39■□□□□ 0.69
SHROOM3Q8TF72 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SHROOM3Q8TF72 BX323043.1-201ENST00000641006 1765 ntBASIC19.39■□□□□ 0.69
SHROOM3Q8TF72 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHROOM3Q8TF72 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHROOM3Q8TF72 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.39■□□□□ 0.69
SHROOM3Q8TF72 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHROOM3Q8TF72 MFAP1P1-201ENST00000442257 1255 ntBASIC19.39■□□□□ 0.69
SHROOM3Q8TF72 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SHROOM3Q8TF72 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.39■□□□□ 0.69
SHROOM3Q8TF72 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.39■□□□□ 0.69
SHROOM3Q8TF72 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.39■□□□□ 0.69
SHROOM3Q8TF72 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.39■□□□□ 0.69
SHROOM3Q8TF72 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms