Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
LPCAT1Q8NF37 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LPCAT1Q8NF37 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.21■□□□□ 0.67
LPCAT1Q8NF37 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LPCAT1Q8NF37 UNC93B2-201ENST00000285383 730 ntBASIC19.21■□□□□ 0.67
LPCAT1Q8NF37 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
LPCAT1Q8NF37 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LPCAT1Q8NF37 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.21■□□□□ 0.67
LPCAT1Q8NF37 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LPCAT1Q8NF37 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.21■□□□□ 0.67
LPCAT1Q8NF37 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.21■□□□□ 0.67
LPCAT1Q8NF37 AC097488.1-201ENST00000507834 756 ntBASIC19.21■□□□□ 0.67
LPCAT1Q8NF37 PRSS44-201ENST00000515154 1146 ntBASIC19.21■□□□□ 0.67
LPCAT1Q8NF37 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.21■□□□□ 0.67
LPCAT1Q8NF37 AL161938.1-201ENST00000569833 2180 ntBASIC19.21■□□□□ 0.67
LPCAT1Q8NF37 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
LPCAT1Q8NF37 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LPCAT1Q8NF37 AP000525.1-201ENST00000608286 694 ntBASIC19.21■□□□□ 0.67
LPCAT1Q8NF37 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.21■□□□□ 0.67
LPCAT1Q8NF37 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LPCAT1Q8NF37 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LPCAT1Q8NF37 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.2■□□□□ 0.66
LPCAT1Q8NF37 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.2■□□□□ 0.66
LPCAT1Q8NF37 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LPCAT1Q8NF37 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LPCAT1Q8NF37 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
LPCAT1Q8NF37 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LPCAT1Q8NF37 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LPCAT1Q8NF37 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LPCAT1Q8NF37 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.2■□□□□ 0.66
LPCAT1Q8NF37 CRYGFP-201ENST00000418459 633 ntBASIC19.2■□□□□ 0.66
LPCAT1Q8NF37 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.2■□□□□ 0.66
LPCAT1Q8NF37 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.2■□□□□ 0.66
LPCAT1Q8NF37 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LPCAT1Q8NF37 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.2■□□□□ 0.66
LPCAT1Q8NF37 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LPCAT1Q8NF37 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LPCAT1Q8NF37 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LPCAT1Q8NF37 AC079598.2-202ENST00000546624 1451 ntBASIC19.2■□□□□ 0.66
LPCAT1Q8NF37 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LPCAT1Q8NF37 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
LPCAT1Q8NF37 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LPCAT1Q8NF37 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
LPCAT1Q8NF37 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LPCAT1Q8NF37 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LPCAT1Q8NF37 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LPCAT1Q8NF37 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LPCAT1Q8NF37 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.19■□□□□ 0.66
LPCAT1Q8NF37 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
LPCAT1Q8NF37 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.19■□□□□ 0.66
LPCAT1Q8NF37 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.19■□□□□ 0.66
LPCAT1Q8NF37 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LPCAT1Q8NF37 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LPCAT1Q8NF37 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
LPCAT1Q8NF37 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LPCAT1Q8NF37 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LPCAT1Q8NF37 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
LPCAT1Q8NF37 MFAP1P1-201ENST00000442257 1255 ntBASIC19.19■□□□□ 0.66
LPCAT1Q8NF37 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LPCAT1Q8NF37 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.19■□□□□ 0.66
LPCAT1Q8NF37 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LPCAT1Q8NF37 CKBP1-201ENST00000565489 1086 ntBASIC19.19■□□□□ 0.66
LPCAT1Q8NF37 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.19■□□□□ 0.66
LPCAT1Q8NF37 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LPCAT1Q8NF37 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
LPCAT1Q8NF37 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LPCAT1Q8NF37 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
LPCAT1Q8NF37 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LPCAT1Q8NF37 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LPCAT1Q8NF37 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
LPCAT1Q8NF37 FP475955.4-201ENST00000623131 1990 ntBASIC19.19■□□□□ 0.66
LPCAT1Q8NF37 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LPCAT1Q8NF37 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.19■□□□□ 0.66
LPCAT1Q8NF37 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LPCAT1Q8NF37 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LPCAT1Q8NF37 AL049812.1-201ENST00000432563 2267 ntBASIC19.18■□□□□ 0.66
LPCAT1Q8NF37 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LPCAT1Q8NF37 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.18■□□□□ 0.66
LPCAT1Q8NF37 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.18■□□□□ 0.66
LPCAT1Q8NF37 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LPCAT1Q8NF37 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LPCAT1Q8NF37 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LPCAT1Q8NF37 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LPCAT1Q8NF37 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.18■□□□□ 0.66
LPCAT1Q8NF37 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LPCAT1Q8NF37 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LPCAT1Q8NF37 AL390955.1-201ENST00000428694 934 ntBASIC19.18■□□□□ 0.66
LPCAT1Q8NF37 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.18■□□□□ 0.66
LPCAT1Q8NF37 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LPCAT1Q8NF37 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.18■□□□□ 0.66
LPCAT1Q8NF37 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LPCAT1Q8NF37 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.18■□□□□ 0.66
LPCAT1Q8NF37 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.18■□□□□ 0.66
LPCAT1Q8NF37 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LPCAT1Q8NF37 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.18■□□□□ 0.66
LPCAT1Q8NF37 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LPCAT1Q8NF37 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LPCAT1Q8NF37 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
LPCAT1Q8NF37 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LPCAT1Q8NF37 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms