Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
ZNF439Q8NDP4 CD99P1-205ENST00000527459 561 ntBASIC15.78■□□□□ 0.12
ZNF439Q8NDP4 RN7SL471P-201ENST00000580476 299 ntBASIC15.78■□□□□ 0.12
ZNF439Q8NDP4 MIR4651-201ENST00000582622 73 ntBASIC15.78■□□□□ 0.12
ZNF439Q8NDP4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.78■□□□□ 0.12
ZNF439Q8NDP4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.78■□□□□ 0.12
ZNF439Q8NDP4 HLA-A-209ENST00000638375 975 ntBASIC15.78■□□□□ 0.12
ZNF439Q8NDP4 AC073648.6-201ENST00000641589 218 ntBASIC15.78■□□□□ 0.12
ZNF439Q8NDP4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF439Q8NDP4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.78■□□□□ 0.12
ZNF439Q8NDP4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.78■□□□□ 0.12
ZNF439Q8NDP4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
ZNF439Q8NDP4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF439Q8NDP4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF439Q8NDP4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF439Q8NDP4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF439Q8NDP4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
ZNF439Q8NDP4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF439Q8NDP4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF439Q8NDP4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF439Q8NDP4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
ZNF439Q8NDP4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
ZNF439Q8NDP4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.77■□□□□ 0.12
ZNF439Q8NDP4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
ZNF439Q8NDP4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC15.77■□□□□ 0.12
ZNF439Q8NDP4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF439Q8NDP4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.77■□□□□ 0.12
ZNF439Q8NDP4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF439Q8NDP4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.77■□□□□ 0.12
ZNF439Q8NDP4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF439Q8NDP4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF439Q8NDP4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF439Q8NDP4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF439Q8NDP4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF439Q8NDP4 AC133681.1-201ENST00000465482 601 ntBASIC15.77■□□□□ 0.12
ZNF439Q8NDP4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC15.77■□□□□ 0.12
ZNF439Q8NDP4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.77■□□□□ 0.12
ZNF439Q8NDP4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC15.77■□□□□ 0.12
ZNF439Q8NDP4 AC006058.3-201ENST00000606217 1069 ntBASIC15.77■□□□□ 0.12
ZNF439Q8NDP4 AC124016.1-201ENST00000609552 612 ntBASIC15.77■□□□□ 0.12
ZNF439Q8NDP4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF439Q8NDP4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC15.77■□□□□ 0.12
ZNF439Q8NDP4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF439Q8NDP4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF439Q8NDP4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC15.77■□□□□ 0.11
ZNF439Q8NDP4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.77■□□□□ 0.11
ZNF439Q8NDP4 AL161938.1-201ENST00000569833 2180 ntBASIC15.77■□□□□ 0.11
ZNF439Q8NDP4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF439Q8NDP4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF439Q8NDP4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF439Q8NDP4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.77■□□□□ 0.11
ZNF439Q8NDP4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
ZNF439Q8NDP4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.77■□□□□ 0.11
ZNF439Q8NDP4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.77■□□□□ 0.11
ZNF439Q8NDP4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 TNXA-203ENST00000507684 2038 ntBASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF439Q8NDP4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF439Q8NDP4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC15.75■□□□□ 0.11
ZNF439Q8NDP4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF439Q8NDP4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.75■□□□□ 0.11
ZNF439Q8NDP4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.75■□□□□ 0.11
ZNF439Q8NDP4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.75■□□□□ 0.11
ZNF439Q8NDP4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
ZNF439Q8NDP4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms