Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.9■□□□□ 0.14
CCDC168Q8NDH2 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC168Q8NDH2 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CCDC168Q8NDH2 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC168Q8NDH2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC168Q8NDH2 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC168Q8NDH2 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC168Q8NDH2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC168Q8NDH2 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CCDC168Q8NDH2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC168Q8NDH2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC168Q8NDH2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC168Q8NDH2 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CCDC168Q8NDH2 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC168Q8NDH2 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CCDC168Q8NDH2 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC168Q8NDH2 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC168Q8NDH2 AC090616.6-201ENST00000582640 721 ntBASIC15.89■□□□□ 0.13
CCDC168Q8NDH2 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC168Q8NDH2 AC099336.1-202ENST00000602961 463 ntBASIC15.89■□□□□ 0.13
CCDC168Q8NDH2 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.89■□□□□ 0.13
CCDC168Q8NDH2 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC168Q8NDH2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC168Q8NDH2 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC168Q8NDH2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC168Q8NDH2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC15.89■□□□□ 0.13
CCDC168Q8NDH2 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC168Q8NDH2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC168Q8NDH2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.89■□□□□ 0.13
CCDC168Q8NDH2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC168Q8NDH2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC168Q8NDH2 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
CCDC168Q8NDH2 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.89■□□□□ 0.13
CCDC168Q8NDH2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC168Q8NDH2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC168Q8NDH2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC168Q8NDH2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CCDC168Q8NDH2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC168Q8NDH2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC168Q8NDH2 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.88■□□□□ 0.13
CCDC168Q8NDH2 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC168Q8NDH2 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.88■□□□□ 0.13
CCDC168Q8NDH2 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC168Q8NDH2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC168Q8NDH2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC168Q8NDH2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC168Q8NDH2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC168Q8NDH2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC168Q8NDH2 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC168Q8NDH2 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC168Q8NDH2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC168Q8NDH2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC168Q8NDH2 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC168Q8NDH2 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC168Q8NDH2 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC168Q8NDH2 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC168Q8NDH2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.88■□□□□ 0.13
CCDC168Q8NDH2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CCDC168Q8NDH2 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC168Q8NDH2 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC168Q8NDH2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC168Q8NDH2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 AC106730.1-201ENST00000566722 1090 ntBASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 AC244015.2-201ENST00000616358 1861 ntBASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 NSUN5P1-202ENST00000421140 1535 ntBASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 NSUN5P2-203ENST00000457352 1529 ntBASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 AC093909.1-201ENST00000504731 1122 ntBASIC15.87■□□□□ 0.13
CCDC168Q8NDH2 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms