Protein–RNA interactions for Protein: Q8NDA2

HMCN2, Hemicentin-2, humanhuman

Predictions only

Length 5,059 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2Q8NDA2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
HMCN2Q8NDA2 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC10.67□□□□□ -0.7
HMCN2Q8NDA2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
HMCN2Q8NDA2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
HMCN2Q8NDA2 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
HMCN2Q8NDA2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 RN7SL606P-201ENST00000472779 293 ntBASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 PPOX-214ENST00000535223 664 ntTSL 3 BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 MTDHP5-201ENST00000598980 586 ntBASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 AC114341.1-201ENST00000618070 349 ntBASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 PON3-203ENST00000427422 894 ntTSL 3 BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 AC009947.1-201ENST00000444350 727 ntBASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 TREX1-205ENST00000625293 1783 ntBASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
HMCN2Q8NDA2 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 AL162377.1-201ENST00000618844 1793 ntBASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 AL390955.2-201ENST00000603032 514 ntBASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 MCCD1P2-201ENST00000423228 335 ntBASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 AL078644.1-201ENST00000609881 752 ntBASIC10.65□□□□□ -0.7
HMCN2Q8NDA2 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
HMCN2Q8NDA2 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
HMCN2Q8NDA2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
HMCN2Q8NDA2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC10.65□□□□□ -0.71
HMCN2Q8NDA2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms