Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTL3Q8N8U3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTL3Q8N8U3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTL3Q8N8U3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RTL3Q8N8U3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RTL3Q8N8U3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTL3Q8N8U3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RTL3Q8N8U3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.53■□□□□ 0.72
RTL3Q8N8U3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTL3Q8N8U3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.53■□□□□ 0.72
RTL3Q8N8U3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RTL3Q8N8U3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RTL3Q8N8U3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTL3Q8N8U3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RTL3Q8N8U3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTL3Q8N8U3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.53■□□□□ 0.72
RTL3Q8N8U3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.53■□□□□ 0.72
RTL3Q8N8U3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTL3Q8N8U3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.53■□□□□ 0.72
RTL3Q8N8U3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RTL3Q8N8U3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTL3Q8N8U3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RTL3Q8N8U3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RTL3Q8N8U3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RTL3Q8N8U3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.53■□□□□ 0.72
RTL3Q8N8U3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RTL3Q8N8U3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RTL3Q8N8U3 AL049812.1-201ENST00000432563 2267 ntBASIC19.53■□□□□ 0.72
RTL3Q8N8U3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RTL3Q8N8U3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RTL3Q8N8U3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTL3Q8N8U3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.52■□□□□ 0.72
RTL3Q8N8U3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RTL3Q8N8U3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.52■□□□□ 0.72
RTL3Q8N8U3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RTL3Q8N8U3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.52■□□□□ 0.72
RTL3Q8N8U3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTL3Q8N8U3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
RTL3Q8N8U3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RTL3Q8N8U3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.52■□□□□ 0.72
RTL3Q8N8U3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.52■□□□□ 0.72
RTL3Q8N8U3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RTL3Q8N8U3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.52■□□□□ 0.72
RTL3Q8N8U3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RTL3Q8N8U3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RTL3Q8N8U3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.52■□□□□ 0.72
RTL3Q8N8U3 BX088651.1-201ENST00000540551 451 ntBASIC19.52■□□□□ 0.72
RTL3Q8N8U3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.52■□□□□ 0.72
RTL3Q8N8U3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
RTL3Q8N8U3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
RTL3Q8N8U3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTL3Q8N8U3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RTL3Q8N8U3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RTL3Q8N8U3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RTL3Q8N8U3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RTL3Q8N8U3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RTL3Q8N8U3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RTL3Q8N8U3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTL3Q8N8U3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTL3Q8N8U3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RTL3Q8N8U3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RTL3Q8N8U3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTL3Q8N8U3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
RTL3Q8N8U3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTL3Q8N8U3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.51■□□□□ 0.71
RTL3Q8N8U3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.51■□□□□ 0.71
RTL3Q8N8U3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTL3Q8N8U3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTL3Q8N8U3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.51■□□□□ 0.71
RTL3Q8N8U3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTL3Q8N8U3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RTL3Q8N8U3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTL3Q8N8U3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.51■□□□□ 0.71
RTL3Q8N8U3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTL3Q8N8U3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTL3Q8N8U3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RTL3Q8N8U3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RTL3Q8N8U3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.51■□□□□ 0.71
RTL3Q8N8U3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RTL3Q8N8U3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTL3Q8N8U3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RTL3Q8N8U3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTL3Q8N8U3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.5■□□□□ 0.71
RTL3Q8N8U3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RTL3Q8N8U3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTL3Q8N8U3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RTL3Q8N8U3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTL3Q8N8U3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RTL3Q8N8U3 MMP23A-201ENST00000234610 1017 ntBASIC19.5■□□□□ 0.71
RTL3Q8N8U3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RTL3Q8N8U3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTL3Q8N8U3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RTL3Q8N8U3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.5■□□□□ 0.71
RTL3Q8N8U3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.5■□□□□ 0.71
RTL3Q8N8U3 CA15P1-201ENST00000481698 905 ntBASIC19.5■□□□□ 0.71
RTL3Q8N8U3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.5■□□□□ 0.71
RTL3Q8N8U3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTL3Q8N8U3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.5■□□□□ 0.71
RTL3Q8N8U3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.5■□□□□ 0.71
RTL3Q8N8U3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms