Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 MCCD1P1-208ENST00000445732 328 ntBASIC29.77■■■□□ 2.36
VPS8Q8N3P4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
VPS8Q8N3P4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC29.77■■■□□ 2.36
VPS8Q8N3P4 MIR3180-5-201ENST00000583743 153 ntBASIC29.77■■■□□ 2.36
VPS8Q8N3P4 MYC-208ENST00000641036 567 ntBASIC29.77■■■□□ 2.36
VPS8Q8N3P4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
VPS8Q8N3P4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
VPS8Q8N3P4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
VPS8Q8N3P4 AL049812.1-201ENST00000432563 2267 ntBASIC29.76■■■□□ 2.35
VPS8Q8N3P4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC29.76■■■□□ 2.35
VPS8Q8N3P4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC29.76■■■□□ 2.35
VPS8Q8N3P4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
VPS8Q8N3P4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC29.76■■■□□ 2.35
VPS8Q8N3P4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC29.76■■■□□ 2.35
VPS8Q8N3P4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC29.76■■■□□ 2.35
VPS8Q8N3P4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
VPS8Q8N3P4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC29.76■■■□□ 2.35
VPS8Q8N3P4 AL023973.1-201ENST00000624619 620 ntBASIC29.76■■■□□ 2.35
VPS8Q8N3P4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
VPS8Q8N3P4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC29.76■■■□□ 2.35
VPS8Q8N3P4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC29.76■■■□□ 2.35
VPS8Q8N3P4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
VPS8Q8N3P4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC29.76■■■□□ 2.35
VPS8Q8N3P4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC29.76■■■□□ 2.35
VPS8Q8N3P4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
VPS8Q8N3P4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC29.76■■■□□ 2.35
VPS8Q8N3P4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
VPS8Q8N3P4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC29.75■■■□□ 2.35
VPS8Q8N3P4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
VPS8Q8N3P4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC29.75■■■□□ 2.35
VPS8Q8N3P4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
VPS8Q8N3P4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC29.75■■■□□ 2.35
VPS8Q8N3P4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC29.75■■■□□ 2.35
VPS8Q8N3P4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC29.75■■■□□ 2.35
VPS8Q8N3P4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC29.75■■■□□ 2.35
VPS8Q8N3P4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC29.75■■■□□ 2.35
VPS8Q8N3P4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
VPS8Q8N3P4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
VPS8Q8N3P4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC29.75■■■□□ 2.35
VPS8Q8N3P4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC29.75■■■□□ 2.35
VPS8Q8N3P4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC29.75■■■□□ 2.35
VPS8Q8N3P4 BX664615.1-201ENST00000443558 458 ntBASIC29.75■■■□□ 2.35
VPS8Q8N3P4 AC063952.2-201ENST00000498792 1227 ntBASIC29.75■■■□□ 2.35
VPS8Q8N3P4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC29.75■■■□□ 2.35
VPS8Q8N3P4 AL441883.1-201ENST00000566170 1045 ntBASIC29.75■■■□□ 2.35
VPS8Q8N3P4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC29.75■■■□□ 2.35
VPS8Q8N3P4 AC139887.4-201ENST00000607877 719 ntBASIC29.75■■■□□ 2.35
VPS8Q8N3P4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
VPS8Q8N3P4 AC068587.9-201ENST00000641814 219 ntBASIC29.75■■■□□ 2.35
VPS8Q8N3P4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
VPS8Q8N3P4 AL109659.2-201ENST00000606809 1674 ntBASIC29.75■■■□□ 2.35
VPS8Q8N3P4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
VPS8Q8N3P4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC29.75■■■□□ 2.35
VPS8Q8N3P4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC29.75■■■□□ 2.35
VPS8Q8N3P4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
VPS8Q8N3P4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
VPS8Q8N3P4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
VPS8Q8N3P4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
VPS8Q8N3P4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
VPS8Q8N3P4 COX11P1-201ENST00000489116 835 ntBASIC29.74■■■□□ 2.35
VPS8Q8N3P4 NME3-204ENST00000563498 920 ntTSL 2 BASIC29.74■■■□□ 2.35
VPS8Q8N3P4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
VPS8Q8N3P4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
VPS8Q8N3P4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC29.74■■■□□ 2.35
VPS8Q8N3P4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC29.74■■■□□ 2.35
VPS8Q8N3P4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC29.74■■■□□ 2.35
VPS8Q8N3P4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC29.74■■■□□ 2.35
VPS8Q8N3P4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
VPS8Q8N3P4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
VPS8Q8N3P4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC29.73■■■□□ 2.35
VPS8Q8N3P4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC29.73■■■□□ 2.35
VPS8Q8N3P4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC29.73■■■□□ 2.35
VPS8Q8N3P4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
VPS8Q8N3P4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC29.73■■■□□ 2.35
VPS8Q8N3P4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
VPS8Q8N3P4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC29.73■■■□□ 2.35
VPS8Q8N3P4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC29.73■■■□□ 2.35
VPS8Q8N3P4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC29.73■■■□□ 2.35
VPS8Q8N3P4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC29.73■■■□□ 2.35
VPS8Q8N3P4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC29.73■■■□□ 2.35
VPS8Q8N3P4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
VPS8Q8N3P4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
VPS8Q8N3P4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
VPS8Q8N3P4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
VPS8Q8N3P4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
VPS8Q8N3P4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
VPS8Q8N3P4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
VPS8Q8N3P4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC29.72■■■□□ 2.35
VPS8Q8N3P4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC29.72■■■□□ 2.35
VPS8Q8N3P4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
VPS8Q8N3P4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC29.72■■■□□ 2.35
VPS8Q8N3P4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
VPS8Q8N3P4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
VPS8Q8N3P4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
VPS8Q8N3P4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC29.72■■■□□ 2.35
VPS8Q8N3P4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
VPS8Q8N3P4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC29.72■■■□□ 2.35
VPS8Q8N3P4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC29.71■■■□□ 2.35
VPS8Q8N3P4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
VPS8Q8N3P4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC29.71■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms