Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
UBR1Q8IWV7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
UBR1Q8IWV7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC27.13■■□□□ 1.93
UBR1Q8IWV7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
UBR1Q8IWV7 AP005901.3-202ENST00000581653 237 ntBASIC27.13■■□□□ 1.93
UBR1Q8IWV7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
UBR1Q8IWV7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC27.12■■□□□ 1.93
UBR1Q8IWV7 HOXB1-202ENST00000577092 1414 ntBASIC27.12■■□□□ 1.93
UBR1Q8IWV7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
UBR1Q8IWV7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
UBR1Q8IWV7 AF238378.1-201ENST00000526806 358 ntBASIC27.12■■□□□ 1.93
UBR1Q8IWV7 AL773604.1-201ENST00000617417 272 ntBASIC27.12■■□□□ 1.93
UBR1Q8IWV7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
UBR1Q8IWV7 SDHAP1-207ENST00000440850 2000 ntBASIC27.12■■□□□ 1.93
UBR1Q8IWV7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC27.12■■□□□ 1.93
UBR1Q8IWV7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC27.11■■□□□ 1.93
UBR1Q8IWV7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC27.11■■□□□ 1.93
UBR1Q8IWV7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
UBR1Q8IWV7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC27.11■■□□□ 1.93
UBR1Q8IWV7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC27.11■■□□□ 1.93
UBR1Q8IWV7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
UBR1Q8IWV7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
UBR1Q8IWV7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC27.11■■□□□ 1.93
UBR1Q8IWV7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC27.11■■□□□ 1.93
UBR1Q8IWV7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC27.11■■□□□ 1.93
UBR1Q8IWV7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
UBR1Q8IWV7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC27.11■■□□□ 1.93
UBR1Q8IWV7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
UBR1Q8IWV7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC27.11■■□□□ 1.93
UBR1Q8IWV7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
UBR1Q8IWV7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
UBR1Q8IWV7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
UBR1Q8IWV7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
UBR1Q8IWV7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC27.1■■□□□ 1.93
UBR1Q8IWV7 AL590627.1-203ENST00000421194 1026 ntBASIC27.1■■□□□ 1.93
UBR1Q8IWV7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC27.1■■□□□ 1.93
UBR1Q8IWV7 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC27.1■■□□□ 1.93
UBR1Q8IWV7 AC090616.6-201ENST00000582640 721 ntBASIC27.1■■□□□ 1.93
UBR1Q8IWV7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC27.1■■□□□ 1.93
UBR1Q8IWV7 Z69720.1-201ENST00000601483 472 ntBASIC27.1■■□□□ 1.93
UBR1Q8IWV7 AF228730.7-201ENST00000641842 219 ntBASIC27.1■■□□□ 1.93
UBR1Q8IWV7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
UBR1Q8IWV7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC27.1■■□□□ 1.93
UBR1Q8IWV7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
UBR1Q8IWV7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC27.1■■□□□ 1.93
UBR1Q8IWV7 KRT8P3-201ENST00000519669 1449 ntBASIC27.1■■□□□ 1.93
UBR1Q8IWV7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC27.1■■□□□ 1.93
UBR1Q8IWV7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
UBR1Q8IWV7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
UBR1Q8IWV7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
UBR1Q8IWV7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC27.1■■□□□ 1.93
UBR1Q8IWV7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC27.1■■□□□ 1.93
UBR1Q8IWV7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
UBR1Q8IWV7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC27.1■■□□□ 1.93
UBR1Q8IWV7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC27.1■■□□□ 1.93
UBR1Q8IWV7 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC27.1■■□□□ 1.93
UBR1Q8IWV7 AC117500.6-201ENST00000624871 588 ntBASIC27.1■■□□□ 1.93
UBR1Q8IWV7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
UBR1Q8IWV7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC27.1■■□□□ 1.93
UBR1Q8IWV7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
UBR1Q8IWV7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC27.09■■□□□ 1.93
UBR1Q8IWV7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
UBR1Q8IWV7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
UBR1Q8IWV7 NSUN5P1-202ENST00000421140 1535 ntBASIC27.09■■□□□ 1.93
UBR1Q8IWV7 NSUN5P2-203ENST00000457352 1529 ntBASIC27.09■■□□□ 1.93
UBR1Q8IWV7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
UBR1Q8IWV7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
UBR1Q8IWV7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC27.09■■□□□ 1.93
UBR1Q8IWV7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
UBR1Q8IWV7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
UBR1Q8IWV7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC27.09■■□□□ 1.93
UBR1Q8IWV7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC27.09■■□□□ 1.93
UBR1Q8IWV7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC27.09■■□□□ 1.93
UBR1Q8IWV7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC27.09■■□□□ 1.93
UBR1Q8IWV7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
UBR1Q8IWV7 AC091607.1-201ENST00000490318 1060 ntBASIC27.09■■□□□ 1.93
UBR1Q8IWV7 AC104390.1-201ENST00000555663 520 ntBASIC27.09■■□□□ 1.93
UBR1Q8IWV7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC27.09■■□□□ 1.93
UBR1Q8IWV7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
UBR1Q8IWV7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC27.09■■□□□ 1.93
UBR1Q8IWV7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
UBR1Q8IWV7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
UBR1Q8IWV7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
UBR1Q8IWV7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
UBR1Q8IWV7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
UBR1Q8IWV7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
UBR1Q8IWV7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC27.08■■□□□ 1.93
UBR1Q8IWV7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
UBR1Q8IWV7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
UBR1Q8IWV7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
UBR1Q8IWV7 KRT18P23-201ENST00000435622 1283 ntBASIC27.08■■□□□ 1.93
UBR1Q8IWV7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC27.08■■□□□ 1.93
UBR1Q8IWV7 FICD-205ENST00000552758 603 ntTSL 2 BASIC27.08■■□□□ 1.93
UBR1Q8IWV7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC27.08■■□□□ 1.93
UBR1Q8IWV7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
UBR1Q8IWV7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
UBR1Q8IWV7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC27.08■■□□□ 1.93
UBR1Q8IWV7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC27.08■■□□□ 1.92
UBR1Q8IWV7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.92
UBR1Q8IWV7 AL512408.1-201ENST00000569378 2000 ntBASIC27.08■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms