Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
UBE3BQ7Z3V4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
UBE3BQ7Z3V4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
UBE3BQ7Z3V4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
UBE3BQ7Z3V4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
UBE3BQ7Z3V4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC23.75■■□□□ 1.39
UBE3BQ7Z3V4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC23.75■■□□□ 1.39
UBE3BQ7Z3V4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
UBE3BQ7Z3V4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
UBE3BQ7Z3V4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
UBE3BQ7Z3V4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
UBE3BQ7Z3V4 CR769767.2-201ENST00000622735 460 ntBASIC23.75■■□□□ 1.39
UBE3BQ7Z3V4 MYC-208ENST00000641036 567 ntBASIC23.75■■□□□ 1.39
UBE3BQ7Z3V4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
UBE3BQ7Z3V4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC23.75■■□□□ 1.39
UBE3BQ7Z3V4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
UBE3BQ7Z3V4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC23.75■■□□□ 1.39
UBE3BQ7Z3V4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC23.74■■□□□ 1.39
UBE3BQ7Z3V4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC23.74■■□□□ 1.39
UBE3BQ7Z3V4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
UBE3BQ7Z3V4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
UBE3BQ7Z3V4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC23.74■■□□□ 1.39
UBE3BQ7Z3V4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
UBE3BQ7Z3V4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC23.74■■□□□ 1.39
UBE3BQ7Z3V4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC23.74■■□□□ 1.39
UBE3BQ7Z3V4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
UBE3BQ7Z3V4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC23.74■■□□□ 1.39
UBE3BQ7Z3V4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC23.74■■□□□ 1.39
UBE3BQ7Z3V4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC23.74■■□□□ 1.39
UBE3BQ7Z3V4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC23.74■■□□□ 1.39
UBE3BQ7Z3V4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
UBE3BQ7Z3V4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
UBE3BQ7Z3V4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
UBE3BQ7Z3V4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
UBE3BQ7Z3V4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
UBE3BQ7Z3V4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC23.74■■□□□ 1.39
UBE3BQ7Z3V4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
UBE3BQ7Z3V4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
UBE3BQ7Z3V4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
UBE3BQ7Z3V4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
UBE3BQ7Z3V4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC23.74■■□□□ 1.39
UBE3BQ7Z3V4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 AC092647.4-201ENST00000457211 535 ntBASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 LINC01238-205ENST00000567549 1107 ntBASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 AC140113.3-201ENST00000605663 199 ntBASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 AC007952.6-201ENST00000573168 2673 ntBASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 AC003957.1-201ENST00000625108 2673 ntBASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC23.73■■□□□ 1.39
UBE3BQ7Z3V4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC23.72■■□□□ 1.39
UBE3BQ7Z3V4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
UBE3BQ7Z3V4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
UBE3BQ7Z3V4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
UBE3BQ7Z3V4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
UBE3BQ7Z3V4 COPE-203ENST00000351079 907 ntTSL 2 BASIC23.72■■□□□ 1.39
UBE3BQ7Z3V4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
UBE3BQ7Z3V4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
UBE3BQ7Z3V4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC23.72■■□□□ 1.39
UBE3BQ7Z3V4 AL023284.2-201ENST00000405850 579 ntBASIC23.72■■□□□ 1.39
UBE3BQ7Z3V4 SAPCD2P2-201ENST00000431719 1174 ntBASIC23.72■■□□□ 1.39
UBE3BQ7Z3V4 AL031432.5-201ENST00000641059 760 ntBASIC23.72■■□□□ 1.39
UBE3BQ7Z3V4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
UBE3BQ7Z3V4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
UBE3BQ7Z3V4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
UBE3BQ7Z3V4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
UBE3BQ7Z3V4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
UBE3BQ7Z3V4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
UBE3BQ7Z3V4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
UBE3BQ7Z3V4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
UBE3BQ7Z3V4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
UBE3BQ7Z3V4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC23.71■■□□□ 1.39
UBE3BQ7Z3V4 KRT8P3-201ENST00000519669 1449 ntBASIC23.71■■□□□ 1.39
UBE3BQ7Z3V4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
UBE3BQ7Z3V4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC23.71■■□□□ 1.39
UBE3BQ7Z3V4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms