Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC005829.2-201ENST00000571422 1056 ntBASIC17.52■□□□□ 0.4
PTCHD4Q6ZW05 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PTCHD4Q6ZW05 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTCHD4Q6ZW05 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTCHD4Q6ZW05 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTCHD4Q6ZW05 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTCHD4Q6ZW05 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PTCHD4Q6ZW05 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTCHD4Q6ZW05 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
PTCHD4Q6ZW05 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PTCHD4Q6ZW05 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTCHD4Q6ZW05 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 IRX1P1-201ENST00000438849 1838 ntBASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 AL512353.2-201ENST00000448759 1962 ntBASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 GUSBP6-202ENST00000438529 1198 ntBASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 TFP1-202ENST00000475455 1573 ntBASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 OR6D1P-202ENST00000641007 5290 ntBASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.51■□□□□ 0.39
PTCHD4Q6ZW05 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 AL390719.1-204ENST00000412397 1219 ntBASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 AC073210.2-201ENST00000430369 194 ntBASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCHD4Q6ZW05 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PTCHD4Q6ZW05 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTCHD4Q6ZW05 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.49■□□□□ 0.39
PTCHD4Q6ZW05 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
PTCHD4Q6ZW05 AC124283.5-201ENST00000624661 1809 ntBASIC17.49■□□□□ 0.39
PTCHD4Q6ZW05 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCHD4Q6ZW05 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.49■□□□□ 0.39
PTCHD4Q6ZW05 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.49■□□□□ 0.39
PTCHD4Q6ZW05 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.49■□□□□ 0.39
PTCHD4Q6ZW05 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PTCHD4Q6ZW05 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms