Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 AC010653.2-201ENST00000623505 997 ntBASIC18.15■□□□□ 0.5
PRAMEF17Q5VTA0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRAMEF17Q5VTA0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRAMEF17Q5VTA0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PRAMEF17Q5VTA0 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.15■□□□□ 0.5
PRAMEF17Q5VTA0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRAMEF17Q5VTA0 AL158211.5-201ENST00000623583 2518 ntBASIC18.15■□□□□ 0.5
PRAMEF17Q5VTA0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRAMEF17Q5VTA0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PRAMEF17Q5VTA0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
PRAMEF17Q5VTA0 RNF165-205ENST00000588679 2904 ntBASIC18.15■□□□□ 0.5
PRAMEF17Q5VTA0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRAMEF17Q5VTA0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRAMEF17Q5VTA0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRAMEF17Q5VTA0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PRAMEF17Q5VTA0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PRAMEF17Q5VTA0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.14■□□□□ 0.49
PRAMEF17Q5VTA0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.14■□□□□ 0.49
PRAMEF17Q5VTA0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF17Q5VTA0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.14■□□□□ 0.49
PRAMEF17Q5VTA0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF17Q5VTA0 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF17Q5VTA0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF17Q5VTA0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF17Q5VTA0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.14■□□□□ 0.49
PRAMEF17Q5VTA0 TSPY23P-201ENST00000440136 739 ntBASIC18.14■□□□□ 0.49
PRAMEF17Q5VTA0 BX664615.1-201ENST00000443558 458 ntBASIC18.14■□□□□ 0.49
PRAMEF17Q5VTA0 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PRAMEF17Q5VTA0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PRAMEF17Q5VTA0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF17Q5VTA0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PRAMEF17Q5VTA0 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.14■□□□□ 0.49
PRAMEF17Q5VTA0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PRAMEF17Q5VTA0 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF17Q5VTA0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF17Q5VTA0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PRAMEF17Q5VTA0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF17Q5VTA0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF17Q5VTA0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF17Q5VTA0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF17Q5VTA0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF17Q5VTA0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF17Q5VTA0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF17Q5VTA0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF17Q5VTA0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.13■□□□□ 0.49
PRAMEF17Q5VTA0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF17Q5VTA0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF17Q5VTA0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.13■□□□□ 0.49
PRAMEF17Q5VTA0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF17Q5VTA0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF17Q5VTA0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PRAMEF17Q5VTA0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF17Q5VTA0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
PRAMEF17Q5VTA0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF17Q5VTA0 AK4P3-201ENST00000418260 669 ntBASIC18.13■□□□□ 0.49
PRAMEF17Q5VTA0 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.13■□□□□ 0.49
PRAMEF17Q5VTA0 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.13■□□□□ 0.49
PRAMEF17Q5VTA0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.13■□□□□ 0.49
PRAMEF17Q5VTA0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.13■□□□□ 0.49
PRAMEF17Q5VTA0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.13■□□□□ 0.49
PRAMEF17Q5VTA0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.13■□□□□ 0.49
PRAMEF17Q5VTA0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
PRAMEF17Q5VTA0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF17Q5VTA0 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF17Q5VTA0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF17Q5VTA0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PRAMEF17Q5VTA0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF17Q5VTA0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF17Q5VTA0 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.12■□□□□ 0.49
PRAMEF17Q5VTA0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF17Q5VTA0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PRAMEF17Q5VTA0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF17Q5VTA0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF17Q5VTA0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.12■□□□□ 0.49
PRAMEF17Q5VTA0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF17Q5VTA0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
PRAMEF17Q5VTA0 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.12■□□□□ 0.49
PRAMEF17Q5VTA0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.12■□□□□ 0.49
PRAMEF17Q5VTA0 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.12■□□□□ 0.49
PRAMEF17Q5VTA0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF17Q5VTA0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.12■□□□□ 0.49
PRAMEF17Q5VTA0 PRSS44-201ENST00000515154 1146 ntBASIC18.12■□□□□ 0.49
PRAMEF17Q5VTA0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF17Q5VTA0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.12■□□□□ 0.49
PRAMEF17Q5VTA0 KRT8P45-201ENST00000414328 1447 ntBASIC18.12■□□□□ 0.49
PRAMEF17Q5VTA0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF17Q5VTA0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.12■□□□□ 0.49
PRAMEF17Q5VTA0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF17Q5VTA0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.12■□□□□ 0.49
PRAMEF17Q5VTA0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.12■□□□□ 0.49
PRAMEF17Q5VTA0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF17Q5VTA0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PRAMEF17Q5VTA0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.11■□□□□ 0.49
PRAMEF17Q5VTA0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF17Q5VTA0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.11■□□□□ 0.49
PRAMEF17Q5VTA0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PRAMEF17Q5VTA0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PRAMEF17Q5VTA0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.11■□□□□ 0.49
PRAMEF17Q5VTA0 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF17Q5VTA0 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms