Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 TSPY23P-201ENST00000440136 739 ntBASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
LRIF1Q5T3J3 LETM1P2-201ENST00000597330 2178 ntBASIC17.96■□□□□ 0.46
LRIF1Q5T3J3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 AL160286.2-201ENST00000567150 934 ntBASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 HLA-A-209ENST00000638375 975 ntBASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 NOC2LP1-202ENST00000452600 2235 ntBASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRIF1Q5T3J3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
LRIF1Q5T3J3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.94■□□□□ 0.46
LRIF1Q5T3J3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRIF1Q5T3J3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
LRIF1Q5T3J3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.94■□□□□ 0.46
LRIF1Q5T3J3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LRIF1Q5T3J3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRIF1Q5T3J3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.94■□□□□ 0.46
LRIF1Q5T3J3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.94■□□□□ 0.46
LRIF1Q5T3J3 AC073592.3-201ENST00000625118 1834 ntBASIC17.94■□□□□ 0.46
LRIF1Q5T3J3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRIF1Q5T3J3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRIF1Q5T3J3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.94■□□□□ 0.46
LRIF1Q5T3J3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.94■□□□□ 0.46
LRIF1Q5T3J3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.94■□□□□ 0.46
LRIF1Q5T3J3 AL138781.1-201ENST00000566567 1274 ntBASIC17.94■□□□□ 0.46
LRIF1Q5T3J3 C1QL1P1-201ENST00000568105 661 ntBASIC17.94■□□□□ 0.46
LRIF1Q5T3J3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.94■□□□□ 0.46
LRIF1Q5T3J3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
LRIF1Q5T3J3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.94■□□□□ 0.46
LRIF1Q5T3J3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.94■□□□□ 0.46
LRIF1Q5T3J3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms