Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP46P62068 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.02■□□□□ 0.8
USP46P62068 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP46P62068 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP46P62068 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP46P62068 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.02■□□□□ 0.8
USP46P62068 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP46P62068 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.02■□□□□ 0.8
USP46P62068 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
USP46P62068 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP46P62068 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.02■□□□□ 0.8
USP46P62068 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP46P62068 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.02■□□□□ 0.8
USP46P62068 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.02■□□□□ 0.8
USP46P62068 AL049597.2-201ENST00000565575 961 ntBASIC20.02■□□□□ 0.8
USP46P62068 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
USP46P62068 AL138966.2-201ENST00000621997 464 ntBASIC20.02■□□□□ 0.8
USP46P62068 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP46P62068 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP46P62068 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.02■□□□□ 0.8
USP46P62068 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
USP46P62068 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP46P62068 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
USP46P62068 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.02■□□□□ 0.8
USP46P62068 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
USP46P62068 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.02■□□□□ 0.79
USP46P62068 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
USP46P62068 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
USP46P62068 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.02■□□□□ 0.79
USP46P62068 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
USP46P62068 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.02■□□□□ 0.79
USP46P62068 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
USP46P62068 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.02■□□□□ 0.79
USP46P62068 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP46P62068 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.01■□□□□ 0.79
USP46P62068 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP46P62068 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.01■□□□□ 0.79
USP46P62068 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.01■□□□□ 0.79
USP46P62068 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.01■□□□□ 0.79
USP46P62068 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.01■□□□□ 0.79
USP46P62068 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP46P62068 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
USP46P62068 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP46P62068 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP46P62068 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
USP46P62068 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP46P62068 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP46P62068 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
USP46P62068 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP46P62068 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP46P62068 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.01■□□□□ 0.79
USP46P62068 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP46P62068 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.01■□□□□ 0.79
USP46P62068 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP46P62068 AL445228.2-201ENST00000605589 952 ntBASIC20.01■□□□□ 0.79
USP46P62068 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
USP46P62068 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP46P62068 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.01■□□□□ 0.79
USP46P62068 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.01■□□□□ 0.79
USP46P62068 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP46P62068 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP46P62068 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20■□□□□ 0.79
USP46P62068 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20■□□□□ 0.79
USP46P62068 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20■□□□□ 0.79
USP46P62068 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
USP46P62068 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
USP46P62068 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP46P62068 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20■□□□□ 0.79
USP46P62068 TSPY21P-201ENST00000433481 731 ntBASIC20■□□□□ 0.79
USP46P62068 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20■□□□□ 0.79
USP46P62068 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20■□□□□ 0.79
USP46P62068 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20■□□□□ 0.79
USP46P62068 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20■□□□□ 0.79
USP46P62068 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP46P62068 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP46P62068 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USP46P62068 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.99■□□□□ 0.79
USP46P62068 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
USP46P62068 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USP46P62068 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
USP46P62068 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.99■□□□□ 0.79
USP46P62068 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
USP46P62068 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP46P62068 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USP46P62068 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP46P62068 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.99■□□□□ 0.79
USP46P62068 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USP46P62068 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.99■□□□□ 0.79
USP46P62068 DUX4L26-201ENST00000489078 1255 ntBASIC19.99■□□□□ 0.79
USP46P62068 KRT18P35-201ENST00000510488 1269 ntBASIC19.99■□□□□ 0.79
USP46P62068 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.99■□□□□ 0.79
USP46P62068 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP46P62068 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
USP46P62068 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP46P62068 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP46P62068 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.99■□□□□ 0.79
USP46P62068 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.99■□□□□ 0.79
USP46P62068 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP46P62068 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
USP46P62068 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms