Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASP6P55212 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CASP6P55212 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASP6P55212 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CASP6P55212 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CASP6P55212 AL450487.1-201ENST00000426799 995 ntBASIC17.09■□□□□ 0.33
CASP6P55212 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.09■□□□□ 0.33
CASP6P55212 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.09■□□□□ 0.33
CASP6P55212 ZNF444P1-201ENST00000559497 298 ntBASIC17.09■□□□□ 0.33
CASP6P55212 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.09■□□□□ 0.33
CASP6P55212 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.09■□□□□ 0.33
CASP6P55212 AC116407.4-201ENST00000623319 1061 ntBASIC17.09■□□□□ 0.33
CASP6P55212 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.09■□□□□ 0.33
CASP6P55212 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CASP6P55212 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASP6P55212 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASP6P55212 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.09■□□□□ 0.33
CASP6P55212 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.09■□□□□ 0.33
CASP6P55212 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CASP6P55212 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.09■□□□□ 0.33
CASP6P55212 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CASP6P55212 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CASP6P55212 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CASP6P55212 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CASP6P55212 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CASP6P55212 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.08■□□□□ 0.33
CASP6P55212 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.08■□□□□ 0.33
CASP6P55212 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CASP6P55212 FEM1AP1-201ENST00000431297 1995 ntBASIC17.08■□□□□ 0.33
CASP6P55212 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CASP6P55212 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
CASP6P55212 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CASP6P55212 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.08■□□□□ 0.32
CASP6P55212 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CASP6P55212 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.08■□□□□ 0.32
CASP6P55212 STARP1-201ENST00000397973 869 ntBASIC17.08■□□□□ 0.32
CASP6P55212 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CASP6P55212 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.08■□□□□ 0.32
CASP6P55212 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.08■□□□□ 0.32
CASP6P55212 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.08■□□□□ 0.32
CASP6P55212 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CASP6P55212 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.08■□□□□ 0.32
CASP6P55212 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CASP6P55212 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CASP6P55212 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CASP6P55212 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CASP6P55212 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CASP6P55212 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CASP6P55212 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CASP6P55212 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.07■□□□□ 0.32
CASP6P55212 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASP6P55212 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CASP6P55212 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASP6P55212 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CASP6P55212 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASP6P55212 LINC01311-201ENST00000565162 1445 ntBASIC17.07■□□□□ 0.32
CASP6P55212 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASP6P55212 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.07■□□□□ 0.32
CASP6P55212 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASP6P55212 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.07■□□□□ 0.32
CASP6P55212 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASP6P55212 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASP6P55212 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASP6P55212 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASP6P55212 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.07■□□□□ 0.32
CASP6P55212 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CASP6P55212 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.07■□□□□ 0.32
CASP6P55212 AC034232.1-201ENST00000506026 1064 ntBASIC17.07■□□□□ 0.32
CASP6P55212 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.07■□□□□ 0.32
CASP6P55212 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.07■□□□□ 0.32
CASP6P55212 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.07■□□□□ 0.32
CASP6P55212 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.07■□□□□ 0.32
CASP6P55212 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.07■□□□□ 0.32
CASP6P55212 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.07■□□□□ 0.32
CASP6P55212 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.07■□□□□ 0.32
CASP6P55212 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CASP6P55212 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASP6P55212 AC026310.3-201ENST00000625186 2373 ntBASIC17.07■□□□□ 0.32
CASP6P55212 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASP6P55212 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CASP6P55212 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CASP6P55212 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.07■□□□□ 0.32
CASP6P55212 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CASP6P55212 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CASP6P55212 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CASP6P55212 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.06■□□□□ 0.32
CASP6P55212 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CASP6P55212 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CASP6P55212 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CASP6P55212 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CASP6P55212 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CASP6P55212 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CASP6P55212 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.06■□□□□ 0.32
CASP6P55212 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CASP6P55212 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.06■□□□□ 0.32
CASP6P55212 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CASP6P55212 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.06■□□□□ 0.32
CASP6P55212 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.06■□□□□ 0.32
CASP6P55212 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CASP6P55212 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms