Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACLYP53396 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACLYP53396 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACLYP53396 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ACLYP53396 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.99■□□□□ 0.95
ACLYP53396 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACLYP53396 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
ACLYP53396 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
ACLYP53396 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.99■□□□□ 0.95
ACLYP53396 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACLYP53396 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.99■□□□□ 0.95
ACLYP53396 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACLYP53396 DRAXINP1-201ENST00000437611 948 ntBASIC20.99■□□□□ 0.95
ACLYP53396 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.99■□□□□ 0.95
ACLYP53396 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.99■□□□□ 0.95
ACLYP53396 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ACLYP53396 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.99■□□□□ 0.95
ACLYP53396 AP000867.3-201ENST00000524675 377 ntBASIC20.99■□□□□ 0.95
ACLYP53396 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.99■□□□□ 0.95
ACLYP53396 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.99■□□□□ 0.95
ACLYP53396 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.99■□□□□ 0.95
ACLYP53396 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.99■□□□□ 0.95
ACLYP53396 AC104692.2-201ENST00000603054 253 ntBASIC20.99■□□□□ 0.95
ACLYP53396 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
ACLYP53396 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACLYP53396 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.99■□□□□ 0.95
ACLYP53396 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.99■□□□□ 0.95
ACLYP53396 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.99■□□□□ 0.95
ACLYP53396 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACLYP53396 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.99■□□□□ 0.95
ACLYP53396 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.99■□□□□ 0.95
ACLYP53396 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
ACLYP53396 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACLYP53396 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ACLYP53396 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACLYP53396 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACLYP53396 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
ACLYP53396 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.98■□□□□ 0.95
ACLYP53396 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACLYP53396 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACLYP53396 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACLYP53396 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACLYP53396 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACLYP53396 LINC00265-3P-201ENST00000447588 903 ntBASIC20.98■□□□□ 0.95
ACLYP53396 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.98■□□□□ 0.95
ACLYP53396 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ACLYP53396 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.98■□□□□ 0.95
ACLYP53396 AC091304.2-201ENST00000564639 760 ntBASIC20.98■□□□□ 0.95
ACLYP53396 RNF126P1-202ENST00000569893 925 ntBASIC20.98■□□□□ 0.95
ACLYP53396 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.98■□□□□ 0.95
ACLYP53396 AL121772.3-201ENST00000610840 674 ntBASIC20.98■□□□□ 0.95
ACLYP53396 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ACLYP53396 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
ACLYP53396 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.98■□□□□ 0.95
ACLYP53396 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACLYP53396 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ACLYP53396 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACLYP53396 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
ACLYP53396 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACLYP53396 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACLYP53396 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACLYP53396 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.97■□□□□ 0.95
ACLYP53396 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACLYP53396 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
ACLYP53396 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.97■□□□□ 0.95
ACLYP53396 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.97■□□□□ 0.95
ACLYP53396 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.97■□□□□ 0.95
ACLYP53396 AL160237.2-201ENST00000556165 472 ntBASIC20.97■□□□□ 0.95
ACLYP53396 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.97■□□□□ 0.95
ACLYP53396 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ACLYP53396 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ACLYP53396 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.97■□□□□ 0.95
ACLYP53396 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACLYP53396 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACLYP53396 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ACLYP53396 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.97■□□□□ 0.95
ACLYP53396 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ACLYP53396 KRT8P3-201ENST00000519669 1449 ntBASIC20.96■□□□□ 0.95
ACLYP53396 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ACLYP53396 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ACLYP53396 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ACLYP53396 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ACLYP53396 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.96■□□□□ 0.95
ACLYP53396 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
ACLYP53396 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
ACLYP53396 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ACLYP53396 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.96■□□□□ 0.95
ACLYP53396 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ACLYP53396 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.96■□□□□ 0.95
ACLYP53396 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.96■□□□□ 0.95
ACLYP53396 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ACLYP53396 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ACLYP53396 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ACLYP53396 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ACLYP53396 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ACLYP53396 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ACLYP53396 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ACLYP53396 AC079781.3-201ENST00000449110 356 ntBASIC20.95■□□□□ 0.94
ACLYP53396 FOSL1P1-201ENST00000511041 816 ntBASIC20.95■□□□□ 0.94
ACLYP53396 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms