Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUBP1P53384 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUBP1P53384 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUBP1P53384 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUBP1P53384 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
NUBP1P53384 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.96■□□□□ 0.63
NUBP1P53384 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUBP1P53384 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUBP1P53384 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.95■□□□□ 0.62
NUBP1P53384 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
NUBP1P53384 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.95■□□□□ 0.62
NUBP1P53384 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NUBP1P53384 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUBP1P53384 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUBP1P53384 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.95■□□□□ 0.62
NUBP1P53384 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NUBP1P53384 AC244015.2-201ENST00000616358 1861 ntBASIC18.95■□□□□ 0.62
NUBP1P53384 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.95■□□□□ 0.62
NUBP1P53384 CCDC152-202ENST00000388827 1237 ntTSL 2 BASIC18.95■□□□□ 0.62
NUBP1P53384 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.95■□□□□ 0.62
NUBP1P53384 AP003733.1-201ENST00000491725 852 ntBASIC18.95■□□□□ 0.62
NUBP1P53384 GUSBP12-201ENST00000513727 720 ntBASIC18.95■□□□□ 0.62
NUBP1P53384 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.95■□□□□ 0.62
NUBP1P53384 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.95■□□□□ 0.62
NUBP1P53384 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.95■□□□□ 0.62
NUBP1P53384 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.95■□□□□ 0.62
NUBP1P53384 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.95■□□□□ 0.62
NUBP1P53384 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.95■□□□□ 0.62
NUBP1P53384 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.95■□□□□ 0.62
NUBP1P53384 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.95■□□□□ 0.62
NUBP1P53384 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
NUBP1P53384 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUBP1P53384 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUBP1P53384 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUBP1P53384 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUBP1P53384 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.95■□□□□ 0.62
NUBP1P53384 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.95■□□□□ 0.62
NUBP1P53384 AC243591.1-201ENST00000452967 1364 ntBASIC18.94■□□□□ 0.62
NUBP1P53384 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUBP1P53384 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUBP1P53384 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUBP1P53384 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUBP1P53384 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.94■□□□□ 0.62
NUBP1P53384 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
NUBP1P53384 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NUBP1P53384 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NUBP1P53384 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUBP1P53384 RPS2P28-201ENST00000314255 741 ntBASIC18.94■□□□□ 0.62
NUBP1P53384 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUBP1P53384 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.94■□□□□ 0.62
NUBP1P53384 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
NUBP1P53384 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NUBP1P53384 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NUBP1P53384 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.94■□□□□ 0.62
NUBP1P53384 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
NUBP1P53384 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.94■□□□□ 0.62
NUBP1P53384 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.94■□□□□ 0.62
NUBP1P53384 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.94■□□□□ 0.62
NUBP1P53384 AC055717.3-201ENST00000622967 595 ntBASIC18.94■□□□□ 0.62
NUBP1P53384 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUBP1P53384 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NUBP1P53384 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NUBP1P53384 NSUN5P1-202ENST00000421140 1535 ntBASIC18.94■□□□□ 0.62
NUBP1P53384 NSUN5P2-203ENST00000457352 1529 ntBASIC18.94■□□□□ 0.62
NUBP1P53384 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUBP1P53384 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.94■□□□□ 0.62
NUBP1P53384 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUBP1P53384 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.93■□□□□ 0.62
NUBP1P53384 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
NUBP1P53384 LRRIQ3-203ENST00000370911 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NUBP1P53384 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NUBP1P53384 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.93■□□□□ 0.62
NUBP1P53384 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NUBP1P53384 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
NUBP1P53384 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NUBP1P53384 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NUBP1P53384 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.93■□□□□ 0.62
NUBP1P53384 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NUBP1P53384 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NUBP1P53384 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NUBP1P53384 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NUBP1P53384 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
NUBP1P53384 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
NUBP1P53384 MIR940-201ENST00000401276 94 ntBASIC18.93■□□□□ 0.62
NUBP1P53384 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.93■□□□□ 0.62
NUBP1P53384 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC18.93■□□□□ 0.62
NUBP1P53384 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NUBP1P53384 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.93■□□□□ 0.62
NUBP1P53384 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.93■□□□□ 0.62
NUBP1P53384 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NUBP1P53384 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.93■□□□□ 0.62
NUBP1P53384 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NUBP1P53384 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NUBP1P53384 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NUBP1P53384 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
NUBP1P53384 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.93■□□□□ 0.62
NUBP1P53384 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NUBP1P53384 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUBP1P53384 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUBP1P53384 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms