Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.48■□□□□ 0.55
PDX1P52945 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.48■□□□□ 0.55
PDX1P52945 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.48■□□□□ 0.55
PDX1P52945 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDX1P52945 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDX1P52945 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDX1P52945 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDX1P52945 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.48■□□□□ 0.55
PDX1P52945 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.48■□□□□ 0.55
PDX1P52945 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.48■□□□□ 0.55
PDX1P52945 AP003041.3-201ENST00000527151 707 ntBASIC18.48■□□□□ 0.55
PDX1P52945 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.48■□□□□ 0.55
PDX1P52945 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDX1P52945 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.48■□□□□ 0.55
PDX1P52945 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
PDX1P52945 AL121956.5-201ENST00000625261 221 ntBASIC18.48■□□□□ 0.55
PDX1P52945 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
PDX1P52945 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.48■□□□□ 0.55
PDX1P52945 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
PDX1P52945 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDX1P52945 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDX1P52945 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDX1P52945 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDX1P52945 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDX1P52945 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDX1P52945 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDX1P52945 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.48■□□□□ 0.55
PDX1P52945 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.48■□□□□ 0.55
PDX1P52945 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDX1P52945 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PDX1P52945 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.48■□□□□ 0.55
PDX1P52945 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.48■□□□□ 0.55
PDX1P52945 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
PDX1P52945 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.48■□□□□ 0.55
PDX1P52945 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PDX1P52945 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.47■□□□□ 0.55
PDX1P52945 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDX1P52945 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDX1P52945 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDX1P52945 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.47■□□□□ 0.55
PDX1P52945 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.47■□□□□ 0.55
PDX1P52945 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
PDX1P52945 PCED1CP-201ENST00000419887 785 ntBASIC18.47■□□□□ 0.55
PDX1P52945 AL359075.1-203ENST00000462729 1002 ntBASIC18.47■□□□□ 0.55
PDX1P52945 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.47■□□□□ 0.55
PDX1P52945 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.47■□□□□ 0.55
PDX1P52945 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDX1P52945 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.47■□□□□ 0.55
PDX1P52945 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.47■□□□□ 0.55
PDX1P52945 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.47■□□□□ 0.55
PDX1P52945 AL158211.5-201ENST00000623583 2518 ntBASIC18.47■□□□□ 0.55
PDX1P52945 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
PDX1P52945 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDX1P52945 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDX1P52945 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PDX1P52945 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDX1P52945 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.46■□□□□ 0.55
PDX1P52945 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDX1P52945 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDX1P52945 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDX1P52945 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDX1P52945 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDX1P52945 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDX1P52945 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDX1P52945 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDX1P52945 HOMER2P1-201ENST00000455653 964 ntBASIC18.46■□□□□ 0.55
PDX1P52945 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.46■□□□□ 0.55
PDX1P52945 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.46■□□□□ 0.55
PDX1P52945 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDX1P52945 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.46■□□□□ 0.55
PDX1P52945 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.46■□□□□ 0.55
PDX1P52945 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.46■□□□□ 0.55
PDX1P52945 AC008622.2-201ENST00000617006 1229 ntBASIC18.46■□□□□ 0.55
PDX1P52945 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
PDX1P52945 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
PDX1P52945 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDX1P52945 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PDX1P52945 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDX1P52945 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDX1P52945 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.46■□□□□ 0.55
PDX1P52945 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.46■□□□□ 0.55
PDX1P52945 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDX1P52945 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.46■□□□□ 0.54
PDX1P52945 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.45■□□□□ 0.54
PDX1P52945 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDX1P52945 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDX1P52945 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.45■□□□□ 0.54
PDX1P52945 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDX1P52945 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.45■□□□□ 0.54
PDX1P52945 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDX1P52945 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDX1P52945 KRT18P38-201ENST00000449496 1282 ntBASIC18.45■□□□□ 0.54
PDX1P52945 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.45■□□□□ 0.54
PDX1P52945 KRT18P56-201ENST00000507275 550 ntBASIC18.45■□□□□ 0.54
PDX1P52945 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.45■□□□□ 0.54
PDX1P52945 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDX1P52945 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.45■□□□□ 0.54
PDX1P52945 AL512604.3-201ENST00000569583 964 ntBASIC18.45■□□□□ 0.54
PDX1P52945 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.45■□□□□ 0.54
PDX1P52945 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms