Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1EP49674 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1EP49674 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.66■□□□□ 0.58
CSNK1EP49674 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1EP49674 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1EP49674 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1EP49674 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.65■□□□□ 0.58
CSNK1EP49674 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CSNK1EP49674 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1EP49674 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1EP49674 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1EP49674 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1EP49674 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1EP49674 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CSNK1EP49674 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1EP49674 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.65■□□□□ 0.58
CSNK1EP49674 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.65■□□□□ 0.58
CSNK1EP49674 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CSNK1EP49674 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
CSNK1EP49674 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.65■□□□□ 0.58
CSNK1EP49674 AC092329.2-201ENST00000598402 547 ntBASIC18.65■□□□□ 0.58
CSNK1EP49674 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CSNK1EP49674 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.65■□□□□ 0.58
CSNK1EP49674 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1EP49674 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.65■□□□□ 0.58
CSNK1EP49674 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1EP49674 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1EP49674 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CSNK1EP49674 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.65■□□□□ 0.58
CSNK1EP49674 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1EP49674 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1EP49674 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CSNK1EP49674 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CSNK1EP49674 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CSNK1EP49674 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.64■□□□□ 0.58
CSNK1EP49674 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1EP49674 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1EP49674 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1EP49674 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1EP49674 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1EP49674 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.64■□□□□ 0.57
CSNK1EP49674 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.64■□□□□ 0.57
CSNK1EP49674 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1EP49674 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.64■□□□□ 0.57
CSNK1EP49674 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1EP49674 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1EP49674 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
CSNK1EP49674 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1EP49674 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.64■□□□□ 0.57
CSNK1EP49674 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.64■□□□□ 0.57
CSNK1EP49674 MIR3652-201ENST00000579335 131 ntBASIC18.64■□□□□ 0.57
CSNK1EP49674 AC011498.5-201ENST00000592027 486 ntBASIC18.64■□□□□ 0.57
CSNK1EP49674 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.64■□□□□ 0.57
CSNK1EP49674 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.64■□□□□ 0.57
CSNK1EP49674 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1EP49674 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.64■□□□□ 0.57
CSNK1EP49674 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1EP49674 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1EP49674 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1EP49674 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CSNK1EP49674 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1EP49674 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1EP49674 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CSNK1EP49674 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CSNK1EP49674 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1EP49674 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.63■□□□□ 0.57
CSNK1EP49674 TCF3P1-201ENST00000423021 1937 ntBASIC18.63■□□□□ 0.57
CSNK1EP49674 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CSNK1EP49674 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.63■□□□□ 0.57
CSNK1EP49674 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.63■□□□□ 0.57
CSNK1EP49674 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CSNK1EP49674 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.63■□□□□ 0.57
CSNK1EP49674 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1EP49674 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.63■□□□□ 0.57
CSNK1EP49674 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.63■□□□□ 0.57
CSNK1EP49674 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.63■□□□□ 0.57
CSNK1EP49674 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.63■□□□□ 0.57
CSNK1EP49674 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.63■□□□□ 0.57
CSNK1EP49674 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1EP49674 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1EP49674 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1EP49674 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CSNK1EP49674 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.63■□□□□ 0.57
CSNK1EP49674 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSNK1EP49674 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSNK1EP49674 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
CSNK1EP49674 AC112907.3-201ENST00000577781 2400 ntBASIC18.62■□□□□ 0.57
CSNK1EP49674 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSNK1EP49674 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.62■□□□□ 0.57
CSNK1EP49674 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSNK1EP49674 TSSC2-201ENST00000450217 709 ntBASIC18.62■□□□□ 0.57
CSNK1EP49674 BX276092.5-203ENST00000456199 560 ntBASIC18.62■□□□□ 0.57
CSNK1EP49674 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.62■□□□□ 0.57
CSNK1EP49674 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.62■□□□□ 0.57
CSNK1EP49674 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.62■□□□□ 0.57
CSNK1EP49674 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.62■□□□□ 0.57
CSNK1EP49674 PRELID1P1-202ENST00000567272 903 ntBASIC18.62■□□□□ 0.57
CSNK1EP49674 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSNK1EP49674 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.62■□□□□ 0.57
CSNK1EP49674 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms