Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GDNFP39905 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.59■□□□□ 0.25
GDNFP39905 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GDNFP39905 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GDNFP39905 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.59■□□□□ 0.25
GDNFP39905 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GDNFP39905 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
GDNFP39905 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GDNFP39905 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GDNFP39905 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
GDNFP39905 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GDNFP39905 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
GDNFP39905 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
GDNFP39905 AC067852.2-201ENST00000590513 2313 ntBASIC16.58■□□□□ 0.25
GDNFP39905 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
GDNFP39905 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
GDNFP39905 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
GDNFP39905 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
GDNFP39905 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
GDNFP39905 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
GDNFP39905 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.58■□□□□ 0.24
GDNFP39905 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.58■□□□□ 0.24
GDNFP39905 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.58■□□□□ 0.24
GDNFP39905 AL589743.5-201ENST00000616611 1050 ntBASIC16.58■□□□□ 0.24
GDNFP39905 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GDNFP39905 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.58■□□□□ 0.24
GDNFP39905 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.58■□□□□ 0.24
GDNFP39905 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GDNFP39905 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GDNFP39905 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
GDNFP39905 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.58■□□□□ 0.24
GDNFP39905 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
GDNFP39905 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
GDNFP39905 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
GDNFP39905 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
GDNFP39905 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.58■□□□□ 0.24
GDNFP39905 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GDNFP39905 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GDNFP39905 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
GDNFP39905 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GDNFP39905 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GDNFP39905 BCL2-203ENST00000589955 5011 ntBASIC16.57■□□□□ 0.24
GDNFP39905 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GDNFP39905 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GDNFP39905 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
GDNFP39905 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GDNFP39905 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GDNFP39905 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
GDNFP39905 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GDNFP39905 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
GDNFP39905 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.57■□□□□ 0.24
GDNFP39905 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GDNFP39905 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
GDNFP39905 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
GDNFP39905 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.57■□□□□ 0.24
GDNFP39905 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
GDNFP39905 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.57■□□□□ 0.24
GDNFP39905 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.57■□□□□ 0.24
GDNFP39905 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.57■□□□□ 0.24
GDNFP39905 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.56■□□□□ 0.24
GDNFP39905 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GDNFP39905 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.56■□□□□ 0.24
GDNFP39905 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GDNFP39905 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GDNFP39905 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GDNFP39905 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GDNFP39905 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
GDNFP39905 LSM12P1-201ENST00000411836 588 ntBASIC16.56■□□□□ 0.24
GDNFP39905 MIPEPP3-201ENST00000412105 444 ntBASIC16.56■□□□□ 0.24
GDNFP39905 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.56■□□□□ 0.24
GDNFP39905 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
GDNFP39905 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GDNFP39905 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.56■□□□□ 0.24
GDNFP39905 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.56■□□□□ 0.24
GDNFP39905 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GDNFP39905 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.56■□□□□ 0.24
GDNFP39905 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.56■□□□□ 0.24
GDNFP39905 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.56■□□□□ 0.24
GDNFP39905 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.56■□□□□ 0.24
GDNFP39905 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
GDNFP39905 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.56■□□□□ 0.24
GDNFP39905 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GDNFP39905 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GDNFP39905 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GDNFP39905 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GDNFP39905 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GDNFP39905 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
GDNFP39905 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GDNFP39905 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
GDNFP39905 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GDNFP39905 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GDNFP39905 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GDNFP39905 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GDNFP39905 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.55■□□□□ 0.24
GDNFP39905 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
GDNFP39905 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GDNFP39905 HTR7P1-202ENST00000624664 4411 ntBASIC16.55■□□□□ 0.24
GDNFP39905 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GDNFP39905 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.55■□□□□ 0.24
GDNFP39905 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms